Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0669 ATGGCTGTGACCACTCCCTGTCTGAATGCCACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAAGATCGTGGAGAAATACATCAGAGACGCTCGGGGTCTGATAGCGACGCAGGAACAGAGCGAGATCGGTTCGGCGCTGAACCTTCTAGACGCGGCTCTGGCGATCTATCCGCGGCACGACGAAGCGCTGGAGCTGAAAGCGAGGTCTCTGCTGTATCTGCGAAGGTTCAAAGAGGTGGCGGATATGCTTCAGGACTACATTCCGAGCCTCAGAATCGCGAACGATGACTCATCCTCTGGTTCCGTTTCTTCGGATAGTGCTTCGCTTTCGAGGGAAGGTTTGAAGCTTCTCTCTCCCTCCGATTCCTCTTCCTCGGCTTCGGATCAGAGTTTCAAATGCTTCTCTGTTTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAACTAGCGACAACCAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGTTGCCACCTAGGCCTAATGGAAGACGCAATGGTCCTTCTCCAAACCGGCAAACGCCTAGCCACAGACGCCTTCCGCCGCGAGAGCGTGTGCTGGTCCGACGACAGCTTCTCCATCTCCAACCCCCTCTTCTCCGGCGACATCCCCACCACCCCACCCCGCGCCCCACTCCCGGAGTCCGAGGCCGTGACCCAACTCCTCGCCCACATAAAGCTCCTCCTCCGTCGCCGCGCCGCCGCACTCGCCGCCCTGGACGCCGGCCTCCCCTCGGAAGCCATCCGCCACTTCACCAAAATCGTGGACAGCCGCCGCGGCGCCCCGCAAGGCTTCCTCGCGGAATGCTACATGTACAGAGCCTCCGCAAACCGCTCCGCCGGCCGAATCGCGGACTCAATAGCCGACTGCAACAGAACCCTCTCCCTGGACCCCACCTGCATCGAAGCCCTCGAAACCAGAGCCTCTCTTCTGGCATCAATTAGGTGCTTCCCAGACTCACTGCACGACCTCGAACACCTGAAGCTCCTCTACAACACCATCCTCCGCGACCGCAAGCTCGCGGGCCCCACCTGGAAGCGCCACAATGTGCGCTACAGAGAAATCCCCGGCAACCTCTGCACCCTCGCCGTCAAAATCCAGGAACTCAAACAGAGGGTGGTTACGTCCGGAGACACCGGGAACAGCAGCGTCGACTACCACGCGCTCATCGGCCTGCGTCGTGGCTGCGGGCGTTCGGAGCTGCAGAGGGCGCATTTGTTGTTATGTCTGAAACACAAACCCGACAAGTCCACGTGCTTCATCGAACGGTGCGAGCTCGCGGACGAGCGCGACCTCGATTCGGTTAAGGAAAGGGCCAAAATGTCGGCGCTGATGCTCTACAGGCTGCTGCAGAAGGGTTACACCAATGTGATGGGTATCATCATGGACGAGGAGGCCGCTGAGAAACAGAGGAAGAAGGTTCTGGAAGCTCAGCTGTTGATGAGTAATGAGATATTGGTGGAGAACAATAATAACTGCACCGTTTCGTCGCCGTCGACGGCGAACCCCTCTGTTTATCAGGGGGTGTTTTGCCGCGATCTTGCGGTGGTGGGGAACTTGCTCTCGCAAGCGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGTTGAGCTGCTGA 1653 0.5808 MAVTTPCLNATEKKHWWLTNRKIVEKYIRDARGLIATQEQSEIGSALNLLDAALAIYPRHDEALELKARSLLYLRRFKEVADMLQDYIPSLRIANDDSSSGSVSSDSASLSREGLKLLSPSDSSSSASDQSFKCFSVSDLKKKVMAGLCKTSDNQGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATDAFRRESVCWSDDSFSISNPLFSGDIPTTPPRAPLPESEAVTQLLAHIKLLLRRRAAALAALDAGLPSEAIRHFTKIVDSRRGAPQGFLAECYMYRASANRSAGRIADSIADCNRTLSLDPTCIEALETRASLLASIRCFPDSLHDLEHLKLLYNTILRDRKLAGPTWKRHNVRYREIPGNLCTLAVKIQELKQRVVTSGDTGNSSVDYHALIGLRRGCGRSELQRAHLLLCLKHKPDKSTCFIERCELADERDLDSVKERAKMSALMLYRLLQKGYTNVMGIIMDEEAAEKQRKKVLEAQLLMSNEILVENNNNCTVSSPSTANPSVYQGVFCRDLAVVGNLLSQAGFNRSIPVKYEALSC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0669 550 PANTHER - 1 550 - -
Aed8g0669 550 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 550 - -
Aed8g0669 550 CDD DnaJ 396 429 IPR001623 -
Aed8g0669 550 Gene3D Tetratricopeptide repeat domain 18 490 IPR011990 GO:0005515
Aed8g0669 550 SUPERFAMILY TPR-like 245 339 IPR011990 GO:0005515
Aed8g0669 550 Pfam Tetratricopeptide repeat 244 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0669 Aed-Chr8 5833408 5836911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0669 - - gmx:100780225 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0669 8 5833408 5836911 Aed8g0669 8 5833408 5836911 ECH
Aed2g2265 2 26160864 26164211 Aed8g0669 8 5833408 5836911 PCT