Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0650 ATGAATTACGCCCGTCTGATTTCCGGCGGAGGATGGCTTCTCCGGCGAATGTGCACGGCGGCTGAGACACCCGCGAAAAAGGTAAGCCTCTATCGAGTGTTATCGTCGCTGGACAAGACCGGAGGTAGCGTGCCGCAAACGCTGGACCAATATGTAATGGAAGGCAAAGCCATCAAAAAAGCAGAACTTGAAAGATGCGTCGAGCAGCTCCGCAAGTATCGCAGATTCCAGCACGCACTCGAGATAATAGAATGGATGCAGATGAGGAAAGTTAATTTTTCCTGGAATAATTTTGCAGTGCAATTAGATCTTGTGTCCAAAACCAAAGGGGTGGTTGCAGCTGAGAATTTTTTCAGCGGTCTTCCTCCTGCAGCCAAGAACAGGTATACCTACGGTGCTCTTCTGAACAGTTACTGTAAGGAACTAATGAAAGACAAGGCTTTGAGTCATTTTGACACCATGAATGAACTGGGTTATGTCACTTCTCTGGCTTTCAACAATTTGATGACTCTGTATATGAAATTGGGTGAACCTCAGAAAGTGCCTCAGCTGGTGGAGCTTATGAAGCATAGGAGCCTCACCCTGCAGGCATTCACGTATCATATCTGGATGAACAGCTGCGTCGCTTTGAATGATCTTGATGGGGCGGAGAGAGTCTTCGAGGAGATGAAAACTGAAGATGAAGACAAAATTGGCTGGCAGACATACAGCAATCTTGCTTCTATTTATGTGAAGGTTAAGGACTTTGCGAAAGCTGAGACGATGCTTAAGATGCTGGAGGAACAAGTGAAGCCAAAGCAGCGCGATGCTTTCCATTGCCTGCTTGGCCTTTATGCAGGGACTGGTAATCTTGGAGAGGTTCATAGAGTGTGGAATTCTCTCAAGTCTTTTTCCCCTGTCACCAACTTCAGCTACCTTGTTATGCTTAGTACCCTCCGAAGGCTTAATGATATTGAGGGGTTAACAAAATGCTTTAAGGAGTGGGAGGCTAGTTGTGTTAGCTATGATGCAAGGTTGGTTAGTGTCTGTGTTAGTGCTCAGTTAAATCTGGACATGCTGGAAGAAGCTGAATTGACATTCGAGGAGGCTAGCAGGAAGAGCAAAGGGCCGTTCTTTAGGGTTCGCGAAGAGTTCATCAAGTTTTTCTTGAAGAAACATCAGTTGGATGATGCTGTGAGGCACTTGGAGGCAGCGCTTTCAGAAGTCAAGGGTGATGATCAATGGCGTCCTTCGCCACTGGTTGTTGGGGCTTTTTTGAAGTACTATGAAGAAGAGACGGATGTTGATGGTGTTGATGAGTTGTGTAAGATTTTCAAGGCTAACAATTTTGATGATTCCTGGATTAAAACTTGCATTACTGCATCATCCGAATCGTCTCCTGAAATTGATCCAAGTGAAGATTCTCAAGTCTACCATGTGCAGGAGAACTAG 1431 0.4556 MNYARLISGGGWLLRRMCTAAETPAKKVSLYRVLSSLDKTGGSVPQTLDQYVMEGKAIKKAELERCVEQLRKYRRFQHALEIIEWMQMRKVNFSWNNFAVQLDLVSKTKGVVAAENFFSGLPPAAKNRYTYGALLNSYCKELMKDKALSHFDTMNELGYVTSLAFNNLMTLYMKLGEPQKVPQLVELMKHRSLTLQAFTYHIWMNSCVALNDLDGAERVFEEMKTEDEDKIGWQTYSNLASIYVKVKDFAKAETMLKMLEEQVKPKQRDAFHCLLGLYAGTGNLGEVHRVWNSLKSFSPVTNFSYLVMLSTLRRLNDIEGLTKCFKEWEASCVSYDARLVSVCVSAQLNLDMLEEAELTFEEASRKSKGPFFRVREEFIKFFLKKHQLDDAVRHLEAALSEVKGDDQWRPSPLVVGAFLKYYEEETDVDGVDELCKIFKANNFDDSWIKTCITASSESSPEIDPSEDSQVYHVQEN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0650 476 MobiDBLite consensus disorder prediction 457 476 - -
Aed8g0650 476 PANTHER OS01G0301500 PROTEIN 3 462 - -
Aed8g0650 476 Gene3D Tetratricopeptide repeat domain 46 162 IPR011990 GO:0005515
Aed8g0650 476 Gene3D Tetratricopeptide repeat domain 163 230 IPR011990 GO:0005515
Aed8g0650 476 Gene3D Tetratricopeptide repeat domain 233 467 IPR011990 GO:0005515
Aed8g0650 476 Pfam PPR repeat 129 158 IPR002885 -
Aed8g0650 476 Pfam PPR repeat 164 191 IPR002885 -
Aed8g0650 476 Pfam PPR repeat 198 226 IPR002885 -
Aed8g0650 476 PANTHER OS12G0527900 PROTEIN 3 462 - -
Aed8g0650 476 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 127 161 IPR002885 -
Aed8g0650 476 SUPERFAMILY TPR-like 198 299 IPR011990 GO:0005515
Aed8g0650 476 TIGRFAM PPR: pentatricopeptide repeat domain 198 226 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0650 Aed-Chr8 5659048 5661042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0650 29 439 EF-hand Containing Proteins AT1G02150 34.940 9.18e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0650 - - gmx:100781679 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0650 8 5659048 5661042 Aed8g0650 8 5659048 5661042 ECH
Aed8g0650 8 5659048 5661042 Aed2g2005 2 24495798 24496781 PCT