Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0506 ATGGAGGAGGTTGGGGAAATGGTGGATAGAAAGGAGCCAGAAGCTGTTGAGGTTCCTTGGAGCCCCGGTACCCCTATTAAGTCCGTTCCTGTGAAACCAGTGCCGATCTACACGGCCGTGGAGAGAAACCAAATGGGTCATCATGCAGACGGAGCAGTTGCATGTGCTGAATTTTCACTTGGACAAGACAAAATTGGTGGGTCAAATGTTGGCGGTGACAGTGGCAAAACTTCTGAACAGACAGTTTCGGATGCTGTTTCCAGCTACGGCAAACTTGGGTTTTGTGAACAATTGTTGGCGGTTGAGGCTGAATCCAGGAACTCCAGTGTGACACAACAAGGGAACAATGATGGATTGAAAATTCCTTTTGTTCCTTCGCTCATCCTTTACAATGTCCAAGACCCTCAGGAAACATACATTGCTTGCTGTAGCATGAAAAATTCACTGGATAACAATGCCAACAAAGAAGAAAGCACAGAAATAACATCAATGCAAGTCAATATAGAAGAAAAGGAACTGGGAGGGGAAGAGAGAAATGTACCACCAAGCAGCAAAGAACTCTGTGACCCTGCCATGGAATTTGCTGCTGCTGATCTTAGTAAAACACCACAACAAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAGAGAAAACAAACCCAAAAGAACTCGGAAGCCTGCTACCCCAAAGCCTGTTCAATCAAAAGAAAACCCACCTGTCAAGAGGAAGTATGTGAGAAAGAATGGAGTGAACAAAACTTCTCCAACAGAAGAGACTGGGGAGTTGTCTAAGGAAATGTCTGGATCATCCAAAAGGTCTTGTAAAAGGTCCTTAAATTTCGACATAGGAACAAGAGATGAAAGTTCTGCTGCCATAGCAAATACAACTGCACAATTGGGAAAAGAAAGCGGTGTTCTTGTACAAGAAACAAATGTAGGTCCTGCATCTGATCTAAACACTTCCATGAAGCAGGCATCAAACAGTTGCATGTCACTACCAGAAGACACACAAACCCTAAATACATTTCCTTCAAGAAGAAAAAGCACTGAGACAAAGCCAGAGGAAAACCCAGCTGTCAAGAGGAAGTCTACGAGAAATAAAAAAGTGAATAAGACTTCTCCAACAGAAGTGACTGGAGAAATGACTAAAGAAAATATGCCAGAATCCACCCAAATGTCATGTGCAAGGTCTGTAAATGTCAATGAAAGAGCAAGAGATCAAAGTCATGCAGTCCAAGGGAATCCAATTGTACATCAGGGCAGTGAAATTGGTGTAGTCATGCAGGATATAAATGTAGGCATTGCCTATGATCTAAACACTGCCATGAAGCAGGCATCAAACAGTTACATGTCATTACCAGAAGACACACAAGCCCCAACTACTTCTTCAAGAAGAAAAAGCTCTGGAACAAAGCCAGAGGAAAACCCACCTCCCAAGAGGAAGTATGTGAGAAGGAAAGGAGTGAACAAGACTTCTGTTCCTCCAATAGAAGTGCCTGGAAAATTGACTAAAGAAACAATGGCTGCATCTGCCCAAACATCAAGAGATCAAGATTATGCAGTCAAAGAGAACCCAACTAGACATCCAGGCAGTGAAATTGGTGTAGTCATGAAGGAAATGAATGTAGGCCTTGCCTATGATTTAAACACTAAGAAGCAGGCATTAAATGATGACGTGACATTACCTAAGGACGCACAAGCCCCATGTTCATCTTCAAAAATCAATCTCCCTGGGAGAAATACAAAAGAAAACCTGACTAGCAAGAGGAAGAATGCAAGGAAAAAAGGATTGAATCCATCTCCCATTCCTCCAACGGAAATGACAGAATTGACTGAAGCAATGATGCTTGAATCTAACAACATGTCATGGAGAAGATCCTTAAACTTTGATATGGGAACTAGAGATGGAAGTTATGTAGGCAGAGAAAATTTAGGTTTGCACATTGGGAAGGAAAATATGGTGTTAGAGGAAACAAAAGTAGGTCTCACCTATAATCAAGACACTTGGATGAAAGAGGCACTAAACAATTGCATGTCATTACCTGAGGAAACACAACACCCAAGTTCGTCTATTTCAAAATGCACTTCCCATGGGGCAAAGCTGAATGCAAACTCTGTAGAGAACAAAAACAAAAAAAGCCGGACAACTGCTCAGGGTGGAAACATCAGTAATACTCAAAGTTCAACAATAAGGCTACAAATGGTTGGTTCAAAGAGAAAACATTCTGGTACCTTTAATTGTGCAAATGACAGCAGCATGAATCTGATTGGAGTGCACTATAATGGACTTCCCTCATACCAAACTAGCTTTTGCCTTCAGTTTCCAACAATACAGAAGAAAAGGAGGACTGAAAACGGAGAAACTTCTAACACTTGTGATACATCTGTGACTTCAACAAAAGAAGTCCAACAGACGTGCCCTCAGCAAGATGCTCTAGGACATCCATATGCATCAAGCTCCAGCTGCTGGATTTATGGTACTGGATATAATACAGCTGGAGTCCCAGCCACAAGTGGTTCGACAGAAAATTTAATTGATAATACTCAAACATTCGACGAGTTTGTGTTGTCTTTGAAAAGGCTGGCAGAAAGATCTCAAACCTCTACTTGTGATCATGGTTCTCTAACCAGAATTAGAAACTGTGATATTGAACCAAATTATACTGCAAAACAAGTAGGCGTCTCTGGCAGAGAAACATTTGGGGGGGATGCAAAAACATGCATTGGTGCTTTAGTTGCAGAGACACGTTCACCACCCACAAAAAAGAAGCGGAATAGAAAGAAAAGAGTTCTTTCAAGTGCAGCACATTCTACCACAAACGAGATGCTACAGAACCATAGTTTTACATTGGCAAATTACCCTCTGTCAATGGAGAAGTCACCAGGCATTGTTCCTGAAGTACTATGGAATACCATGAACAATATTGATGCATTAACATTGCAATTTAGACTACTAAACATAAACGCAGAAGCCAGAGATCTTGCATTTCATGAGCAGAATGCACTTGTCCCTTATAAACAGCAAAACAGCCTTATCCAAGGAGATGGGGTCATTGTTCCCTTCCACAACAAGAAACAGCATCTACGACCAAAGGTCGACCTTGATGATGAGACGGATAGAGTTTGGAAGCTTTTGCTGTTAGATATAAACAGCCATGGGATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGGAAGAAGAACGAAATGTGTTCCGAGGACGAGCAGACTCTTTTATTGCACGAATGCATCTGGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAAAATGTCTCTGACCATCTTTCCAGCTCTGCATTCATGACCCTTGCTGCTCGATTTCCCAAAAATTCAAGCAGCATTTGTGAAACACACCATGCAGAAGACACAAGGTTTGTAGTCAACGAACCACAAGTGCATATAGTGGAACTGGAAGAGAGTGCAGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGACTCCTCTGACAAAAGATATAGTTGAACATTCTGGAGAAAAAGAAACCATCGACTGCAATGAATCCTGTGGAACTACCAGCAGTGTAATTAGCTTAACAGATGAATCAAACTCCAGATTCTCAGAATTACCTCACAGGAATATTAAGGAGCACTGTAGTCCAATGAGGAGTGAACTACTTAGTGCTACAATTGAGGAAGGAGAAGACAAATCATGTTACGATGGTGATAAGAAAGAGTTAAATGACATAGTTTCATCCCAAGGCTCTGTCATTTCATCTCAAATATCTGGAGATTTTTCAAACGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCAGAAGTAGAAGTTCTGTCCTGCACAGCAAAGTACAACCATTATGATAGCAACACTTCCTTCTGTAAACTCCTTGAAATGGTTAGTTCAACCAAGTTTTATGGAGATAACGGTCAAAAAAGTGAATCAATTGAGAACTTAACAGATGCATATGATCAACCTCTACACCAGCAGCATAACAACCCAATAGAAAGCTTGAAAAAATCAAGTGTTACTCAAGGCTCTTCAGAAGCATCCATCATCCAATCCCATGAATATACTTTGAAACTCAGCCCCAACTCAGGAATGCTTGAAGTTAACTGCTTTGATCCTTTCAATACAGAAGCCTCAACAAGTGATTTCTTGAAGAAAAAGGATGAAAATGGCATGAACAGATCTAGTCTTCAAACAACAGAACCTGCAGGCCAAGTTGCAATTTCTGGACAAACTCAAGATCTTATGCAGAAAGAAAGGGGTTCAAATCTTGGTGAGCACAAAAATGCGGTGAGGAATGGAACCAATGAGATAAGTTCTGCTCCAATAAAATTAAAGAGCAAGGAACAAGGAAAAGAAAAAAAGGATGATTTTAACTGGGATAGTTTAAGAATTGAAGCACAGGCTAAGGCTGGGAAAAGAGAAAAGACAGAAAACACCATGGATTCTTTGGACTGGGATGCTGTGAGATGTGCAGATGTCAGTAAAATCGCTGAGATCATCAAAGAACGGGGAATGAACAACAGGCTTGCAGAACGTATTAAGAATTTCCTGAATCGACTGGTTGACGATCATGGAAGCATTGACCTTGAATGGCTGAGAGATGTTCCACCTGACAAAGCAAAAGAATACTTGCTCAGCGTTAGAGGATTGGGATTGAAAAGTGTGGAATGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTTGGACGTATAGCAGTACGACTGGGATGGGTCCCTCTGCAGCCACTGCCTGAGTCACTGCAGTTGCATCTCTTAGAATTGTACCCGGTGTTGGAGTCGATACAGAAATTTCTCTGGCCTCGACTGTGCAAGCTAGATCAGAAAACACTATATGAGTTACATTACCAAATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGCAATGCATGCCCAATGAGAGGAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCACTGCCTGGACCAGAGGAGAAGAGTATAGTTAGCACAGCTGGAAATAGTGTGATTGACCAGAACCCATCTGAAATCATCAGTCAGTTGCACTTGCCTCCCCCTGAGAACACAGCCCAAGCAGAAGAAATTCAACTAACAGAAGTGAGCAGACAATTGGAATCAAAATCTGAAATAAATATTTGCCAACCTATCATTGAAGAGCCCACAACTCCAGAGCCAGAATGCTCACAAGTATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCATGTGAAATTCCAACCATCAATCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAATATGGAACTTCAAGAAGGTGAAATGTCAAAGGCATTGGTTGCTTTGAATCCAGAAGCTGCTTCCATTCCTATGCCCAAGCTGAAGAATGTGAGCCGATTACGAACAGAGCACTGTGTTTATGAACTCCCAGATACACATCCTCTTCTGCAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATATCTTCTTGCTATATGGACTCCAGGTGAGACAGCAAGTTCTATACAGACACCAGAAAGCCAATGCAGCTCTCAAGAAGAATGTGGCCAACTCTGTAATGAGAAGGAATGTTTCTCGTGCAACAGTTACCGTGAAGCAAATTCACAGATAGTTAGAGGGACACTCCTGATACCATGTCGAACAGCTATGCGGGGGAGCTTTCCACTGAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCTTAACCCAATTAGTGTGCCCCGAAGTTGGATCTGGAGCCTCAATAGGCGAACAGTATATTTTGGAACCTCCGTAACAACAATATTTAAAGGTGAAGACTTGAGAATTCATTGTTTACCAACACAAGGAATTCAACAATGCTTTTGGAGAGGGTATGTCTGTGTGCGGGGGTTTGACAGGAAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGACCAAGACCAAAGAGAAGCCAAAAAAGGAGTCGAGTTCGGTAAAGTCACAAGGATTGAAACCAAACCCAGAACAGCCGGAATAG 6186 0.4187 MEEVGEMVDRKEPEAVEVPWSPGTPIKSVPVKPVPIYTAVERNQMGHHADGAVACAEFSLGQDKIGGSNVGGDSGKTSEQTVSDAVSSYGKLGFCEQLLAVEAESRNSSVTQQGNNDGLKIPFVPSLILYNVQDPQETYIACCSMKNSLDNNANKEESTEITSMQVNIEEKELGGEERNVPPSSKELCDPAMEFAAADLSKTPQQKPRRRKHRPKVIRENKPKRTRKPATPKPVQSKENPPVKRKYVRKNGVNKTSPTEETGELSKEMSGSSKRSCKRSLNFDIGTRDESSAAIANTTAQLGKESGVLVQETNVGPASDLNTSMKQASNSCMSLPEDTQTLNTFPSRRKSTETKPEENPAVKRKSTRNKKVNKTSPTEVTGEMTKENMPESTQMSCARSVNVNERARDQSHAVQGNPIVHQGSEIGVVMQDINVGIAYDLNTAMKQASNSYMSLPEDTQAPTTSSRRKSSGTKPEENPPPKRKYVRRKGVNKTSVPPIEVPGKLTKETMAASAQTSRDQDYAVKENPTRHPGSEIGVVMKEMNVGLAYDLNTKKQALNDDVTLPKDAQAPCSSSKINLPGRNTKENLTSKRKNARKKGLNPSPIPPTEMTELTEAMMLESNNMSWRRSLNFDMGTRDGSYVGRENLGLHIGKENMVLEETKVGLTYNQDTWMKEALNNCMSLPEETQHPSSSISKCTSHGAKLNANSVENKNKKSRTTAQGGNISNTQSSTIRLQMVGSKRKHSGTFNCANDSSMNLIGVHYNGLPSYQTSFCLQFPTIQKKRRTENGETSNTCDTSVTSTKEVQQTCPQQDALGHPYASSSSCWIYGTGYNTAGVPATSGSTENLIDNTQTFDEFVLSLKRLAERSQTSTCDHGSLTRIRNCDIEPNYTAKQVGVSGRETFGGDAKTCIGALVAETRSPPTKKKRNRKKRVLSSAAHSTTNEMLQNHSFTLANYPLSMEKSPGIVPEVLWNTMNNIDALTLQFRLLNINAEARDLAFHEQNALVPYKQQNSLIQGDGVIVPFHNKKQHLRPKVDLDDETDRVWKLLLLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMTLAARFPKNSSSICETHHAEDTRFVVNEPQVHIVELEESAEWDVKLLNQSVYDQTPLTKDIVEHSGEKETIDCNESCGTTSSVISLTDESNSRFSELPHRNIKEHCSPMRSELLSATIEEGEDKSCYDGDKKELNDIVSSQGSVISSQISGDFSNDQNPEKIGSCSDSNSEVEVLSCTAKYNHYDSNTSFCKLLEMVSSTKFYGDNGQKSESIENLTDAYDQPLHQQHNNPIESLKKSSVTQGSSEASIIQSHEYTLKLSPNSGMLEVNCFDPFNTEASTSDFLKKKDENGMNRSSLQTTEPAGQVAISGQTQDLMQKERGSNLGEHKNAVRNGTNEISSAPIKLKSKEQGKEKKDDFNWDSLRIEAQAKAGKREKTENTMDSLDWDAVRCADVSKIAEIIKERGMNNRLAERIKNFLNRLVDDHGSIDLEWLRDVPPDKAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKFLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEEKSIVSTAGNSVIDQNPSEIISQLHLPPPENTAQAEEIQLTEVSRQLESKSEINICQPIIEEPTTPEPECSQVSQTDIEDAFYEDSCEIPTINLNIEEFTLNLQNYMQENMELQEGEMSKALVALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETASSIQTPESQCSSQEECGQLCNEKECFSCNSYREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWSLNRRTVYFGTSVTTIFKGEDLRIHCLPTQGIQQCFWRGYVCVRGFDRKTRAPRPLMARLHFPASKLTKTKEKPKKESSSVKSQGLKPNPEQPE 2061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0506 2061 Gene3D - 1584 1699 IPR023170 -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 917 938 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 1450 1480 - -
Aed8g0506 2061 Pfam RRM in Demeter 1922 2029 IPR028925 -
Aed8g0506 2061 Pfam Permuted single zf-CXXC unit 1887 1919 IPR028924 -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 290 348 - -
Aed8g0506 2061 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 145 342 IPR044811 GO:0019104|GO:0035514|GO:0080111
Aed8g0506 2061 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 349 467 IPR044811 GO:0019104|GO:0035514|GO:0080111
Aed8g0506 2061 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 465 572 IPR044811 GO:0019104|GO:0035514|GO:0080111
Aed8g0506 2061 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 579 2046 IPR044811 GO:0019104|GO:0035514|GO:0080111
Aed8g0506 2061 MobiDBLite consensus disorder prediction 452 468 - -
Aed8g0506 2061 CDD ENDO3c 1509 1627 IPR003265 GO:0006284
Aed8g0506 2061 MobiDBLite consensus disorder prediction 469 483 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 372 393 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 567 584 - -
Aed8g0506 2061 Coils Coil 1793 1813 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 349 364 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 1 21 - -
Aed8g0506 2061 SUPERFAMILY DNA-glycosylase 1076 1684 IPR011257 GO:0003824|GO:0006281
Aed8g0506 2061 MobiDBLite consensus disorder prediction 2032 2047 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 1452 1467 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 154 393 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 1 16 - -
Aed8g0506 2061 SMART ccc3 1662 1682 IPR003651 GO:0051539
Aed8g0506 2061 MobiDBLite consensus disorder prediction 452 534 - -
Aed8g0506 2061 Gene3D Hypothetical protein; domain 2 1487 1583 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 251 265 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 205 230 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 704 727 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 566 607 - -
Aed8g0506 2061 MobiDBLite consensus disorder prediction 2030 2061 - -
Aed8g0506 2061 SMART endo3end 1489 1661 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0506 Aed-Chr8 4311299 4323139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0506 - - gmx:100806794 2808.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0506 8 4311299 4323139 Aed8g0506 8 4311299 4323139 ECH
Aed2g1941 2 23966041 23976783 Aed8g0506 8 4311299 4323139 PCT