Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0490 ATGGCGTCAACGCAACAAGACGAACGAGCTGGGGCAGCTGCAAAAGTCGCTGCCAAAGAACTCGAGCAAGCCAACGGAGAAAGAGAGCATAATTTGGGTGTTGCGGACCCACAACAACAGCGCGGTGTAATCGGGTCCGTGTTTAAGGCGGTGCAAGACACCTACGAGAATGCCAAGGAAGCTGTTGTAGGAAAGAAAGACCCTTCCACCAATGCCAACGACGCCCACGCTACTACAGAGGTTATTCACGACGTTGACATTCAACCCGATGAAGTGGTGGCAAAGGGGGAAGTGAGGGACATTTCAGCCACCAAGTCTCCTGGTATCTACGAATCTGCCACGGACGACGCAGATTGCGCTTCTCAGAAGGCCAAGGAAACAAAAGACGCAACGAAGCAAAAAGCTGGGGAGTACACTGATTACGCTACGCAGAAGGCGAAGGAGACTAAGGACACAACGAAGCAGAAGGCAGGGGAGTACACAGATTACGCTTCTCAGAAAGCGAAGGAAACAAAAGACGCAACGATGCAGAAGGGTGGGGAGTACACTGATTACGCTTCTCAGAAGGCGAAGGAGACTAAAGACGCAACGATGCAGAAGGGTGGGGAGTACACTGATTACGCTTCTCAGAAAGCGAAGGAAACAAAAGACGCAACGATGCAGAAGGGTGGGGAGTACACTGACTACGCTTCTCAGAAAGCGAAGGAAACAAAAGACGCAACGATGCAGAAGGCTGGGGAGTACAAGGACTATGCTGCTGAGAAGGCTAAAGAGGGAAAAGATGCTACGGTGGATAAGGTGGGTGAGTATAAGGATTATACTGCTGAGAAGGCCAAGGAAGGGAAAGACACGACGTTGGGGAAGCTTGGGGAGTTTAAGGACTCTGCTGCGGATGCAGCCAAGAGGGCTGTTGGTTACTTGAGCGGCAAGACAGAGGAAACTAAGGAGAAGGCTGCGGAGACGGCCGAGGCGACAGCGAATAAGGCCGCGGAGGTGAAGGAGGCAGCCAGGAACAAGACCTCGGAGACGGCCGATGCGACAGCGAATAAGGCTGCGGAGATGAAGGAGGCGGCCAAGAACAAGACCTCGGAGACGGCGGAGGCAGCGAAGAATAAGGCTGCAGAGATGAAGGACAGAGCTGCGGAGACTGCTGAAGCAACGAAGAACAAAACTGCGGAAACTGCTGAGGCAGCGAAGAATAAGGCTGTAGAAACAAAGGATGCGGCGAAGAACAAGGCTGCAGAGACTACAGAGGCAGCAAGGCAGAAAACTGCACAGGCAACTGATGCAGCAAAACAGAAAACTGCGCAGGCAAAGGAGAACACCAAGGAAAATGTGAGTGGTGCAGATGAAGCTACGAGGAGGAAAATAGAGGAGTTGAGGCTGCAGGGTAAAGGATACGGAGGGGAACCCAAGGGACGTGGAGACAAAGTGGTGGTGAAAGTGGAGGAGAGTCAACCGGGGGCGGTGGTGGAGACGCTGAAAGAGGCGGATCAGATTGCGGGACAGACCTTCAACGATGTGGGACGCTTCGATGAAGAGGGTGTTGTCAATGTGGAGCGCCGCAAGAAATAG 1575 0.5302 MASTQQDERAGAAAKVAAKELEQANGEREHNLGVADPQQQRGVIGSVFKAVQDTYENAKEAVVGKKDPSTNANDAHATTEVIHDVDIQPDEVVAKGEVRDISATKSPGIYESATDDADCASQKAKETKDATKQKAGEYTDYATQKAKETKDTTKQKAGEYTDYASQKAKETKDATMQKGGEYTDYASQKAKETKDATMQKGGEYTDYASQKAKETKDATMQKGGEYTDYASQKAKETKDATMQKAGEYKDYAAEKAKEGKDATVDKVGEYKDYTAEKAKEGKDTTLGKLGEFKDSAADAAKRAVGYLSGKTEETKEKAAETAEATANKAAEVKEAARNKTSETADATANKAAEMKEAAKNKTSETAEAAKNKAAEMKDRAAETAEATKNKTAETAEAAKNKAVETKDAAKNKAAETTEAARQKTAQATDAAKQKTAQAKENTKENVSGADEATRRKIEELRLQGKGYGGEPKGRGDKVVVKVEESQPGAVVETLKEADQIAGQTFNDVGRFDEEGVVNVERRKK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0490 524 MobiDBLite consensus disorder prediction 1 40 - -
Aed8g0490 524 Gene3D Apolipoprotein 327 463 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 118 177 - -
Aed8g0490 524 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 1 153 - -
Aed8g0490 524 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 435 524 - -
Aed8g0490 524 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 153 319 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 207 221 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 309 477 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 106 242 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 392 417 - -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 183 226 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 227 270 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 344 386 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 249 291 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 205 248 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 271 303 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 117 160 IPR004238 -
Aed8g0490 524 Pfam Late embryogenesis abundant protein 161 204 IPR004238 -
Aed8g0490 524 PANTHER DAUER UP-REGULATED-RELATED 1 153 - -
Aed8g0490 524 PANTHER DAUER UP-REGULATED-RELATED 153 319 - -
Aed8g0490 524 Coils Coil 315 339 - -
Aed8g0490 524 Coils Coil 352 426 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 418 435 - -
Aed8g0490 524 Gene3D - 111 162 - -
Aed8g0490 524 Gene3D - 163 205 - -
Aed8g0490 524 Gene3D - 251 323 - -
Aed8g0490 524 Gene3D - 206 250 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 352 386 - -
Aed8g0490 524 PANTHER DAUER UP-REGULATED-RELATED 435 524 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 436 477 - -
Aed8g0490 524 MobiDBLite consensus disorder prediction 185 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0490 Aed-Chr8 4162631 4165217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0490 - - ccaj:109795465 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0490 8 4162631 4165217 Aed8g0490 8 4162631 4165217 ECH
Aed2g1923 2 23811962 23813159 Aed8g0490 8 4162631 4165217 PCT