Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0481 ATGGTTCCCAACCAAACACACTCCAACCTCGTTGGCTCCGAAGTTTGCAAACGAAACAACATGTCCACTAAATTCCGGGGATCACAAGAACAACACCAACATGGTTCTTCTTCTTCTTCCAGCAACACTTCACACGTTCCCCCTGCCCAAGCTGCTGGACTTGTTGCTATTTTTAAGGATAAAAGTGTTGATGAGTTGCGGAAGCTTTTATCTAACAAAGATGAATATCAGAAGTTTTTAAGTTCACTTGATGAGGTCAAGATTCAAAATAAGGTGAATGATGAACTTTGCAAGGAGAATCTGCAGCTTGCCGATAAAAATTTACAAAAGGAACCTCGTATTGTGGAACTCAGGAACCAGTATGAATTTTCTCCATCCTCCTATGGAAACAAGGCTATGAATAAGACAGAAGAGAAATCTGAAAATCTGCATCAGCAAGTCCTTGACAGAGAGATTGACCTTGGAGCTTTTCTGCAGAAATACAAAAAGCTACGTACAGCTTACCACAGGAAAAGTCTCATACATCTTGCAGCTAGAATATCATAG 546 0.4048 MVPNQTHSNLVGSEVCKRNNMSTKFRGSQEQHQHGSSSSSSNTSHVPPAQAAGLVAIFKDKSVDELRKLLSNKDEYQKFLSSLDEVKIQNKVNDELCKENLQLADKNLQKEPRIVELRNQYEFSPSSYGNKAMNKTEEKSENLHQQVLDREIDLGAFLQKYKKLRTAYHRKSLIHLAARIS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0481 181 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 131 179 - -
Aed8g0481 181 SUPERFAMILY Endosomal sorting complex assembly domain 131 171 IPR037202 -
Aed8g0481 181 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 22 121 - -
Aed8g0481 181 Pfam Modifier of rudimentary (Mod(r)) protein 59 121 IPR009851 -
Aed8g0481 181 Pfam Modifier of rudimentary (Mod(r)) protein 131 173 IPR009851 -
Aed8g0481 181 Gene3D Helix hairpin bin 127 175 IPR029012 -
Aed8g0481 181 MobiDBLite consensus disorder prediction 24 47 - -
Aed8g0481 181 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 131 179 - -
Aed8g0481 181 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 22 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0481 Aed-Chr8 4092920 4096771 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0481 K12185 - gmx:100797771 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1912 2 23744740 23748219 Aed8g0481 8 4092920 4096771 PCT