Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0478 ATGTCTCCAGCAATGGTAGGAAGTGGTGAGAGTGATGCACCTGCAGGAACTCAATATCAGAAAGGAGTGACGCAGCTTCTTGAGAATTCCAATGGCCTTCTTCACACAATACCTAAAAAGTACATACTTCCACCTTCTGAACGACCTGCTACAAATTCTTCAGAAGATTCAAATGTTGCCAAACAAAACCTTCAGCTACCCATCATCGATTTTTCTGAGTTGCTTGGTCCAAGAAGGCCCCAAGTTCTTCAATCCCTAGCCAATGCTTGTGAACAGTACGGTTTTTTTCAGGTGGTAAACCATGGAATCTCAGATGATGTTATAAGCAGCATGAGGGATGTGAGTGGAAGGTTCTTCGATCTTCCAATTGAGGAGAGAGCCAAGCACATGACAACTGATATGCGTGCACCTGTTAGATATGGAACAAGCTTCAGCCAAACCAAAGACACTATATACAGCAACGGGAAGTACAAGAGCGTGTTGCATAGGGTTGTTGTTAACGAAGTGAAAAAAAGGACTTCTGTGGCTTCGCTGCATAGCCTTCCTTTCAACTGCACGGTAAGACCGTCACCCAAACTCATTGACGAAGCCAACCCCAGACGCTACGCAGACACCAATTTCGACACTTTTCTTGCATACGTTACCACCAGAGAGCCTAAGAGAAAGGAATTCCTCGACTCTAGGAAATTGACTTCTACTTGA 702 0.4459 MSPAMVGSGESDAPAGTQYQKGVTQLLENSNGLLHTIPKKYILPPSERPATNSSEDSNVAKQNLQLPIIDFSELLGPRRPQVLQSLANACEQYGFFQVVNHGISDDVISSMRDVSGRFFDLPIEERAKHMTTDMRAPVRYGTSFSQTKDTIYSNGKYKSVLHRVVVNEVKKRTSVASLHSLPFNCTVRPSPKLIDEANPRRYADTNFDTFLAYVTTREPKRKEFLDSRKLTST 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0478 233 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 15 152 - -
Aed8g0478 233 MobiDBLite consensus disorder prediction 1 20 - -
Aed8g0478 233 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 158 IPR026992 -
Aed8g0478 233 SUPERFAMILY Clavaminate synthase-like 34 148 - -
Aed8g0478 233 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 151 230 - -
Aed8g0478 233 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 151 230 - -
Aed8g0478 233 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 152 - -
Aed8g0478 233 Gene3D - 15 151 IPR027443 -
Aed8g0478 233 Gene3D - 152 232 IPR027443 -
Aed8g0478 233 SUPERFAMILY Clavaminate synthase-like 151 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0478 Aed-Chr8 4074462 4078005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0478 20 118 Glycosyltransferase AT5G59530 28.713 6.96e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0478 - - gmx:100818253 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0478 8 4074462 4078005 Aed8g0478 8 4074462 4078005 ECH
Aed2g1909 2 23717849 23720828 Aed8g0478 8 4074462 4078005 PCT