LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g2405	ATGCAGGCCGTGGAAGAAGGCGGCGGCAGCGGCGGCGACGGTGAGGAGCGAAATGCGGGTTTTGAGGAAAACGATTTGGACTCGGAAATTTCCAAGTTGCGCGGGCGATGGGAACTCGCTTCTGTTCTCAATTTTCTGGACGTAAGAGATCTGAAATTTTCGTTGAAATCGTCTTTTGTAGATTACGAAATCGTTCAGGAGTCTGTGTGTGTTTTCAGTGAGAGTAGAGTGACCCGCAATGTGTTTGGTCCGATACTTGGAAAAGATTTGAAGCTTTCTGCTGAAGATATTGAGATTGGGCTTGTTAAGGCTGACGCTTCACTCGCTCGGCTTCACATTCAAGTTTTGAAGGGAATGCCACCTGTGAGTAAAACATTGGAGGATTCTGATAAGTGGGTGACTGCACTCTGTAAGAAACTGAGTGTGTGGTGGCCATGGGTTGCGGAGGGGGAGATTCCACTTGTAGCATCTAAAGGAGAGGAGATATCGAAGTACAAGGAACTTGATCCGTCAGATCGTTTAATACTGCTAAAAGCGCTTTGTGAAGTTAGAGCTGAGCAACATGATGCACTGTCATACATCAATGATGCTTTAAAAGAAGGAACCCAAATTTCATCTTTTCGCAAAGATGCCTTAGGAAGAGATGGAACTGGCACATCTTACTGGTACGATGCAACTTCAAAAGGTCAGAGTCACAGATTGTACAGAGAAATCATCACATCAGACTCAATTCCAAAAGATAAGGATCAAGGATGTTTATCGCTCCCCACTGTTCAATGGGAAACACTTGCTTCCAATCTTGAAGATTTTTCAAAAGTAGCTGAAAAATTTGCATTCAGCAAGTTTTCTGTGGAAGTTGCTGTTAGCATGAGTCTTCAAGATGATGCTATTCCTGCTCTTGAAAAGCTTCAGAAGAAGAAAGAAAGAGCAATAAGGCAAAAGCAAAGGCAGGATATGCTGTTAAAAAAAGATTTTCAGAATTCTGATTATTCTGGAAATACACGCTCTTGTCGCACTCGAAGACCTATTAGTTATACATTTGAAGCTTATGATCGAACAATGAAGGAGGCAATACAGCTAACCAATAAAAGGAGAAAGTCTCCTGTAGCTGAACAAGATAAAACCGGAGGATCAGAAGATAAATCCAACACAAAAGATGTTTCAACAGACAGTGATTCCGAAAGGGGAGTGTTTCCGATATCTGATAGTGATGACACTGGTTACGAAGTTGAGAATCATGGTAGCCGCGAGGAGGAGAATGGTGTTGATGGTGAGTCGGGCAACTTGGAAGCACCCTCAAGCCATGCGGTTTCTTATCCAAAAGGGGTTCGCTGCAGCAAGCGATTAGCCGGAGTTCCTAGCCACACTATTTTAGAAAGCAGAGGCTTAACTGCAAAGCAAACATTGAGGCAAAGACCTACCCGCAATTCTGCTATCGAATCTATCATCGTATCCGATTCAGAGGACGAAGCGCATGAAGGGAAGAGAGATTTGTCTGAGTCTACTTAG	1509	0.4354	MQAVEEGGGSGGDGEERNAGFEENDLDSEISKLRGRWELASVLNFLDVRDLKFSLKSSFVDYEIVQESVCVFSESRVTRNVFGPILGKDLKLSAEDIEIGLVKADASLARLHIQVLKGMPPVSKTLEDSDKWVTALCKKLSVWWPWVAEGEIPLVASKGEEISKYKELDPSDRLILLKALCEVRAEQHDALSYINDALKEGTQISSFRKDALGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPKDKDQGCLSLPTVQWETLASNLEDFSKVAEKFAFSKFSVEVAVSMSLQDDAIPALEKLQKKKERAIRQKQRQDMLLKKDFQNSDYSGNTRSCRTRRPISYTFEAYDRTMKEAIQLTNKRRKSPVAEQDKTGGSEDKSNTKDVSTDSDSERGVFPISDSDDTGYEVENHGSREEENGVDGESGNLEAPSSHAVSYPKGVRCSKRLAGVPSHTILESRGLTAKQTLRQRPTRNSAIESIIVSDSEDEAHEGKRDLSEST	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	359	440	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	359	392	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	466	483	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	314	337	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	1	21	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	406	423	-	-
	Aed7g2405	502	PANTHER	DDT DOMAIN-CONTAINING PROTEIN DDR4	31	407	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	485	502	-	-
	Aed7g2405	502	MobiDBLite	consensus disorder prediction	466	502	-	-
	Aed7g2405	502	PANTHER	REMODELING AND SPACING FACTOR 1	31	407	IPR028938	GO:0006355\|GO:0031213
	Aed7g2405	502	Coils	Coil	300	320	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g2405	Aed-Chr7	25975215	25979630	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g2405	-		-	gmx:100781163	577.015