Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2399 ATGCCTTTGGGAGAAAGAACAGGGGATAAGAGCGAGTCTCGCTACTGCGGTATAGAGACCGAGTTCAACGATGACATGCCACACGTCCTCCATTTCAACCTCTATTCTGGCAGTTTCGATTTCGTTGTTGCTACTTTGATGGATCCTTCTTATCGGCCAAGTTTAGTAGTGCAAAAGGATGGTTTGGGGTCTGGTGTTCTGCCATTTGCTGGGTCAGACTTGGTCTTGAGTCCATCCCAATGGAGTAGTCATGTAGTTGGAAAAATTAGCTCATGGATAGACTTGGATTCAGAGGATGAAACCCTCAGGATAGATTCTGAAACCACTCTTAAACAAGAAATTGCTTGGGCTTCCCATCTCTCTTTACAGGCCTGCCTTCTTCCTGCTCCCAAGGGAACTTCTTGTGCTAATTATGCTAGATGTGTGAATCAGATCTTACAGGGTTCAAATAGTATGCAGTTGTGGCTTAGGGTTCCATTGGTGAAGCATGATGATGATTCTATGGATGCAAAGTCTGTTGCTTTGGTTGACTCCTGGGAAACTTGGAATTCATTTCGTCTTCTGTGTGAGCATCATACTCAACTTTCAGTTGCACTTGATATTCTGAGTACTCTTCCTTCCACTAATTCACTTGGACGTTGGTTTGGGGAGCCTGTTAGAGCAGCTATATTAAATACTGATATCATTATATCTGGAAATTCAGTTCTTCCCAAAGCAAGTGTGGATGCAAATGATAATTCTGATTCAAAAAGGCATCCCTTGCGGCCATATCTGGACTATGTTGGATATCTATACCAAAGAATGGATCCTCTTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCACCCTTGCAACCTTTGATGGATAATTTAGAGGCTCAGACTTATGAGACTTTTGAGAGAGATGCAGTGAAATACATTCAGTACCAAAGAGCAGTTAGTAAAGCATTGCTGGACAGGGTTCCTGATGAAGAGGCATCTGTTAAAACCATTGTATTGATGGTTGTTGGGGCAGGACGTGGGCCACTTGTGCGGGCATCATTACAGGCTGCTGAAGAAACTGGGCGGAAGCTCAAAGTTTATGCCGTTGAAAAGAATCCAAATGCAGTTGTTACCCTACATGCATTAGTCAAGTTAGAAGGATGGGAGGATACTGTCACCATAGTTTCAAGTGACATGCGTCATTGGAATGCCACTGAAAAGGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGTGACAATGAACTGTCTCCTGAGTGCCTTGATGGAGCACAAAGGTTTCTAAAGCAAGATGGAATTTCAATACCATCTTCGTATGTAATTGCTTCTACTCCATTTGTTGTTACTGATTTATCTTTCCTGTACACAAGTTTCCTCCAACCAGTGACAGCTTCAAAGTTATATAATGATGTTAAGGCTCATAAAGACCTTGTACATTTTGAAACTGCTTATGTTGTGAAAATGCACAATATAGCCAGACTTGCACCAACCCAACCTGTTTTTACATTTACTCATCCTAAGCAGTCTGATAAAGAAAGTAATCAGCGCTATAAAAAGTTGAATTTTGTGATACCTAATGACACTGGCTCAGCAATGTTACACGGATTTGCTGGTTATTTTGATGCAACTCTTTACAAGGATGTGCATCTTGGAATTGAACCTTCAACAGCAACACCAAACATGTTCAGTTGGTTTGCAATATTTTTCCCATTAAGGGCACCCATATGTGTGGATCCTGGTTGTACACTTGAAGTACATTTCTGGCGCTGTTGTGGTTCTACAAAGGTTTGGTATGAGTGGTGTGTTGCTTCACCCTCATCGTCCCCAATTCACAACAGTAATGGACGTTCATACTGGGTTGGACTTTAG 1890 0.4185 MPLGERTGDKSESRYCGIETEFNDDMPHVLHFNLYSGSFDFVVATLMDPSYRPSLVVQKDGLGSGVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETLRIDSETTLKQEIAWASHLSLQACLLPAPKGTSCANYARCVNQILQGSNSMQLWLRVPLVKHDDDSMDAKSVALVDSWETWNSFRLLCEHHTQLSVALDILSTLPSTNSLGRWFGEPVRAAILNTDIIISGNSVLPKASVDANDNSDSKRHPLRPYLDYVGYLYQRMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFERDAVKYIQYQRAVSKALLDRVPDEEASVKTIVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVVTLHALVKLEGWEDTVTIVSSDMRHWNATEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYVIASTPFVVTDLSFLYTSFLQPVTASKLYNDVKAHKDLVHFETAYVVKMHNIARLAPTQPVFTFTHPKQSDKESNQRYKKLNFVIPNDTGSAMLHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRAPICVDPGCTLEVHFWRCCGSTKVWYEWCVASPSSSPIHNSNGRSYWVGL 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2399 629 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 232 - -
Aed7g2399 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 300 628 IPR029063 -
Aed7g2399 629 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 285 607 IPR025799 GO:0016274|GO:0018216
Aed7g2399 629 PIRSF PRMT5 3 243 IPR007857 GO:0006479|GO:0008168|GO:0035246
Aed7g2399 629 PIRSF PRMT5 232 629 IPR007857 GO:0006479|GO:0008168|GO:0035246
Aed7g2399 629 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 232 IPR025799 GO:0016274|GO:0018216
Aed7g2399 629 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 228 629 IPR025799 GO:0016274|GO:0018216
Aed7g2399 629 Pfam PRMT5 oligomerisation domain 462 627 IPR035248 -
Aed7g2399 629 Gene3D - 14 274 - -
Aed7g2399 629 Gene3D Vaccinia Virus protein VP39 277 444 IPR029063 -
Aed7g2399 629 Pfam PRMT5 TIM barrel domain 39 239 IPR035247 -
Aed7g2399 629 Gene3D - 461 629 - -
Aed7g2399 629 Pfam PRMT5 arginine-N-methyltransferase 273 442 IPR035075 -
Aed7g2399 629 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 228 629 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2399 K02516 - gmx:100782245 1168.3