Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2389 ATGCAACAACAAGGCAAAGAAATGGAAGGGTTGTCATCTTCATCAGCGATTGCGCAAAAAACATGGGAACTCGAGAACAACATCATCCCTATGGACACTCCCGCCGCCGCCAGCTCCAGTAGCACCACCACAACGACGACGAACGCCGACGACTCGATCTTCTACTACGACGAGGCCGGGCAGAACGAGTTCCAGCGCGACAAGCCCTGGGCCAATGACCCCCACTATTTCAAGCGCGTGAAGATCTCTGCACTCGCGCTCCTCAAGATGGTCGTCCACGCGCGCTCCGGCAGCACCATCGAGGTTATGGGCCTCATGCAGGGCAAGACCGAAGCCGACGCCATCATCGTCATGGACGCTTTTGCCCTCCCTGTCGAAGGCACCGAGACTCGCGTAAATGCCCAGGCCGATGCGTACGAGTACATGGTCGATTATTCTCAGACAAACAAACAGGCTGGGCGGTTGGAGAATGTTGTGGGATGGTATCACTCTCACCCTGGGTACGGGTGCTGGCTTTCGGGGATCGATGTTTCGACTCAGATGCTGAATCAGCAGTTTCAGGAACCGTTTCTGGCGGTTGTGATTGACCCGACGAGGACCGTTTCTGCTGGGAAATATTATTCCTTGGATATCACTTACTTTAAGTCCTCGCTTGATTCACACCTCTTGGACCTGCTGTGGAACAAGTATTGGGTGAATACACTGTCGTCTTCTCCTCTGTTGGGTAATGGAGATTATGTTGCTGGACAAATCTCCGACTTAGCTGAGAAGCTAGAACAAGCAGAGAATCAGTTGGCACACTCACGCTTTGGACCACTAATAGCACCTACACCTAGAAAGAAAGAGGAGGAATCTCCACTTGCTAAGATTACTCGTGACAGTGCAAAAATAACTGTGGAGCAAGTGCATGGTCTAATGTCACAGGTCATCAAGGACATTCTATTTAACTCCGTCCATCAAGCAAACAGAACTCGCACAGAAGCATCTGGTCCTGAACCAATGATTGAAAGCTGA 1014 0.5118 MQQQGKEMEGLSSSSAIAQKTWELENNIIPMDTPAAASSSSTTTTTTNADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGSTIEVMGLMQGKTEADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRTRTEASGPEPMIES 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2389 337 PANTHER BNAC07G13420D PROTEIN 43 205 IPR037740 GO:0004222|GO:0008180
Aed7g2389 337 PANTHER BNAC07G13420D PROTEIN 204 329 IPR037740 GO:0004222|GO:0008180
Aed7g2389 337 SUPERFAMILY JAB1/MPN domain 79 198 - -
Aed7g2389 337 SMART pad1_6 79 219 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed7g2389 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 43 205 - -
Aed7g2389 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 204 329 - -
Aed7g2389 337 Gene3D Cytidine Deaminase, domain 2 11 242 - -
Aed7g2389 337 Pfam Cop9 signalosome subunit 5 C-terminal domain 236 316 IPR040961 -
Aed7g2389 337 ProSiteProfiles MPN domain profile. 80 215 IPR037518 -
Aed7g2389 337 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 77 188 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed7g2389 337 CDD MPN_RPN11_CSN5 69 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2389 Aed-Chr7 25866303 25870234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2389 K09613 - gmx:100817371 625.165