Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2362 ATGGTGTGTGCCCTTGTCACTGTTTTTGGCATGGAAACCAATGGAAGAATCAAGAAGGAAAATGCAAGGCAAGTGGTGGAGAAGCTTGGTTTGATGTATGAGGTGCCTGAGGGTGATGATGAGGTGCCAGTGCAAGAGGTGCTTGGGGAGTTGGATCATGAGGACATGTCAAAGCGTAGTGAACTGTTGCATGAAGCTTTCAAAATCTTTGATGAGGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTGCTTCATTGCTTGGGTTTGGACAAGGGTTGGGATATGAATACTATTCAGAACATGGTCAAGGTGGCAGATTTGAACTTCGATGGCAAGGTTGATTTTTGTGAGTTTGAATTGATGATGGGGTAG 381 0.4462 MVCALVTVFGMETNGRIKKENARQVVEKLGLMYEVPEGDDEVPVQEVLGELDHEDMSKRSELLHEAFKIFDEDGDGYIDAMELKRVLHCLGLDKGWDMNTIQNMVKVADLNFDGKVDFCEFELMMG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2362 126 Pfam EF-hand domain pair 62 125 IPR002048 GO:0005509
Aed7g2362 126 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Aed7g2362 126 SUPERFAMILY EF-hand 8 125 IPR011992 -
Aed7g2362 126 CDD EFh 63 121 IPR002048 GO:0005509
Aed7g2362 126 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 27 125 - -
Aed7g2362 126 SMART efh_1 62 90 IPR002048 GO:0005509
Aed7g2362 126 PANTHER CALCIUM-BINDING PROTEIN CML42 27 125 - -
Aed7g2362 126 Gene3D - 4 126 - -
Aed7g2362 126 ProSiteProfiles EF-hand calcium-binding domain profile. 96 126 IPR002048 GO:0005509
Aed7g2362 126 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2362 Aed-Chr7 25673000 25673380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2362 63 125 EF-hand Containing Proteins AT4G20780 53.968 1.43e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2362 - - gmx:100527700 207.994