Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2350 ATGGGTTACTTCCACTATGGAAGAAACGGTCTCAGGCACATATTCAGATTCAAAACAGCCACCGGCGTGGGCAGATCGCAATCGCTCACTGCATTACATTCTCATTCCCCTTTCCTTGGCGGCAACGCGCTTTTCTCCACAGCTTCCGACGCGAGATTCTTGCAGGAAATTATGGCTGACGTGCAGCGCGACAGGCTCAGGGAGCGAAACGAGCGTTTGCGCCTTGGCCTAGACACCGCGGACATCGACGCCGAGTCGGAGCAGGACTACATGGGCGTGGGCCCCCTCATCGCGAAGCTCGAGAAGGAGAAGCTCAAGGACTCCCCCGACCTGAACCGTTTCGAGGAGCCCACGGACTCCGACGACGACTCCGACGAGGAAACCAAGGAAGATGTCGACAAGAGGAAGGACGACTTCGAGAAGAAGTTCGACAAGCACGAGCTTCTTCTCAAGAACTTCGCCGAAGCCGAAACCCTAGACGACGCGTTCAAGTGGATGACCAAAATAGACACCTTCGAGCACAAACATTTCCGCCTCCGCCCCGAGTACAGGGTCATCGGCGAGCTCGTGAATAGACTCAAAGTGGCGACGGAGCAGAAAGATAAGTTTGTTCTGCAGAATAAGCTTAACAGGGCGTTGAGGTTGGTGCGGTGGAAGGAGGCTTATGATCCTGATAACCCTGCCAATTATGGCGTGATTCAGCGTGAGCAGCCCACCGCGGACGCGCGGGAAGAGGCCGAGTTTGAGAAGGAGAAGCAGAAGCAGATTGAGGAAGGAGATAATGCCAATGCCGCTGCCGATGATGATGATGATGAGCAGGAGTTTGATGACATGAAGGAGAAGGATAATGTACTGCTGGCCAAACTTGAGGCTATTGATAGGAAGCTCGAAGAGAAATTGGCCGAGCTCGAGTATACTTTTGGGAGGAAGGGGAAGGCGCTCGAGGAAGAGATCAAGGATCTTGCTGAGGAGAGAAATGAATTGACTGAGCAGAAGAGAAAGCCGCTTTACCGGAAGGGTTTTGATACAAGGTTGATAGACATGAACCGTACTTGTAAAGTCACAAAGGGAGGACAAGTCGTGAAGTATACTGCCATGGTAGCTTGTGGCAACTATAATGGTGTTATTGGTTTTGCAAAAGCCAAAGGTCCTGCAGTCCCAGTTGCCCTTCAGAAGGCATACGAGAAATGCTTCCAGAATTTGCATTATATAGAGCGACATGAGGAGCATACAATTGCACATGCAGTGCAAACGTCTTTTAAAAAAACCAAGGTTTATCTCTGGCCTGCTCCCACTACAACTGGCATGAAAGCCGGCAGAACAGTTGAAGCCATCCTGCATTTGGCAGGTTTAAAGAATGTGAAGTCGAAGGTCATTGGTTCCAGAAACCCTCATAATACAGTGAAGGCTGTCTTCAAAGCACTTAATGCGATTGAGACGCCAAGGGATGTCCAAGAGAAGTTTGGCAGGACTGTGGTTGAGAAGTACCTGTTGTGA 1497 0.5063 MGYFHYGRNGLRHIFRFKTATGVGRSQSLTALHSHSPFLGGNALFSTASDARFLQEIMADVQRDRLRERNERLRLGLDTADIDAESEQDYMGVGPLIAKLEKEKLKDSPDLNRFEEPTDSDDDSDEETKEDVDKRKDDFEKKFDKHELLLKNFAEAETLDDAFKWMTKIDTFEHKHFRLRPEYRVIGELVNRLKVATEQKDKFVLQNKLNRALRLVRWKEAYDPDNPANYGVIQREQPTADAREEAEFEKEKQKQIEEGDNANAAADDDDDEQEFDDMKEKDNVLLAKLEAIDRKLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEQKRKPLYRKGFDTRLIDMNRTCKVTKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYIERHEEHTIAHAVQTSFKKTKVYLWPAPTTTGMKAGRTVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKALNAIETPRDVQEKFGRTVVEKYLL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2350 498 SUPERFAMILY Ribosomal protein S5 domain 2-like 410 488 IPR020568 -
Aed7g2350 498 PANTHER RIBOSOMAL S SUBUNIT 89 498 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed7g2350 498 MobiDBLite consensus disorder prediction 262 276 - -
Aed7g2350 498 Gene3D - 292 402 - -
Aed7g2350 498 Gene3D - 406 495 IPR014721 -
Aed7g2350 498 SUPERFAMILY dsRNA-binding domain-like 336 406 - -
Aed7g2350 498 Coils Coil 311 334 - -
Aed7g2350 498 Coils Coil 286 306 - -
Aed7g2350 498 Pfam Ribosomal protein S5, N-terminal domain 341 405 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed7g2350 498 MobiDBLite consensus disorder prediction 238 258 - -
Aed7g2350 498 Pfam Ribosomal protein S5, C-terminal domain 420 487 IPR005324 GO:0003735|GO:0005840|GO:0006412
Aed7g2350 498 MobiDBLite consensus disorder prediction 108 133 - -
Aed7g2350 498 MobiDBLite consensus disorder prediction 237 276 - -
Aed7g2350 498 ProSiteProfiles S5 double stranded RNA-binding domain profile. 341 404 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed7g2350 498 PANTHER 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL 89 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2350 K02988 - gmx:100800084 801.586