Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2349 ATGGCCCTTCTTCACCTCCCAAGGTTCCCTCTCTACTTGGTGACCTCATCTCCTCTTCGAGCCTACGCCACTGCCACCAAAATCAGCCTATTACGCCCACCCAAATCCTCTCTCACCACCTCAGAACCCGTAACCGTCAACCCTTCCTCCCCCGCAGAGTTATCCCTCGAGAAGCTCTTCGTTCCGCCGGAGACCACCGTGTCCCTGGAAAGTTCCAGAGTCTTGAACGGTTCAAACATTATACTCAGCAAATACGCCAACGACGCCCAGGTATTGCAGGCCGACTTTGTGAAAAGCAGTGTGGATACCGAACAATGCCCCTCCGATGGCCTCCCTGAGTTCGCCCTCGTCGGCCGCTCCAACGTCGGCAAATCCTCGCTCCTCAACTCCATCGTCCGCCGCAAGAAGCTCGCCTTAACTTCCAAGAAACCTGGCAAAACACAATGTATAAACCATTTTCGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCATGACCTTAGGATGGATTGGGAAAAATTCACCAAGGACTATTTCCTCAACCGCTCAACATTAGTTTCAGTATTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAAATTGATCTTGACTATGCCAGTTGGTTGGGTCAGAATAAGATCCCAATGACATTAATCTTCACCAAATGTGACAAGCGGAAAAAGAAAAAGAATGGAGGCAAAAGACCAGAAGAAAATGTTGATGATTTTCAGGACTTGATTCAAGGTTTCTTCCAATCAGTGCCTCCGTGGATCATGACCAGTAGCGTTACCAATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGGAACTACTGGCTCAAGCACTAA 885 0.487 MALLHLPRFPLYLVTSSPLRAYATATKISLLRPPKSSLTTSEPVTVNPSSPAELSLEKLFVPPETTVSLESSRVLNGSNIILSKYANDAQVLQADFVKSSVDTEQCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPHDLRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNKIPMTLIFTKCDKRKKKKNGGKRPEENVDDFQDLIQGFFQSVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2349 294 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 39 291 - -
Aed7g2349 294 CDD YihA_EngB 113 287 IPR030393 GO:0005525
Aed7g2349 294 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 39 291 - -
Aed7g2349 294 Pfam 50S ribosome-binding GTPase 114 231 IPR006073 GO:0005525
Aed7g2349 294 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 94 282 IPR019987 GO:0005525
Aed7g2349 294 Gene3D - 87 290 IPR027417 -
Aed7g2349 294 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 110 290 IPR030393 GO:0005525
Aed7g2349 294 Hamap Probable GTP-binding protein EngB [engB]. 99 288 IPR019987 GO:0005525
Aed7g2349 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 290 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2349 Aed-Chr7 25565841 25569649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2349 K03978 - gmx:100784426 513.072