Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2348 ATGGCTCCTCCGCCACCGCAGTCTCATCGATCGGCCTCACCGTCGCAACCGTCAGGGAAGAGTGAAGTCTCCGATCTGAAATCACAGCTCCGGCAGCTTGCAGGGAGCCGAGCTCCGGGTGCTGATGATTCTAAGAGGGATCTCTTCAAGAAGGTGATTTCCAACATGACTATAGGTATTGATGTCTCATCTCTCTTTGGCGAGATGGTAATGTGCTCTGCAACATCAGACATTGTTCTGAAAAAAATGTGCTACCTATATGTTGGGAACTATGCAAAGGTCAATCCTGATCTTGCACTTTTGACGATTAATTTTCTGCAAAGAGATTGCAAGGATGAGGATCCAATGATTCGGGGACTCGCATTGAGGAGTTTGTGTTCACTCCGGGTGGCAAACTTGGTGGAATATTTGGTTGGGCCATTAGGGTCCGGGTTGAAGGACAACAATAGTTATGTTAGGACGGTGGCAGTTATTGGGGTTTTGAAACTGTATCATATATCAGCTTCCACCTGTATTGATGCAGATTTTCCATCAACACTGAAGCATTTGTTGCTCAATGACCCTGATACTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCATCAACATCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTACTTAGCAAGCCACTTGTATATTACCTTTTGAATCGCATTAAGGAATTTAGTGAATGGGCTCAATGCCTTGTGCTGGAATTGGTGTCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACTAAAGTATTTCTACAGTTGACCATGTCTATGGCTGATGTGCATCAGCAGGTATATGAGCGCATCAAAGCCCCTCTCTTGACTCAAGTGAGCTCAGGAAGTCCAGAACAATCTTATGCAGTTTTAAGTCACCTGCATGTTTTGGTCATGCGTGCACCCTATATATTTTCCTCAGACTACAAACACTTCTATTGCCAGTATAATGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTCGACATTCCCATTGCAAGGGAATCAATTCGAGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGACTTCTCCAGTTTCTTGAGATGGAAAAGGACTATGTTACTTCTGAAGCTCTGACTAATGCGAAGTTTGAAAGTTCATTTGTTCAGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGAAATATCAGTAGTAAAAATGTTCAAGAACCCAAGGCTAAGGCAGCTCTTATATGGATGTTGGGGGAATATTCTCAGGACATGCATGATGCTCCGTATGTCTTGGAGAGTTTAGTTGAAAACTGGGATGAGGAGCATTCTGCTGAGGTTCGCTTACATCTTCTTACTGCAGTTATGAAGTGTTTCTTTAAGCGACCACCTGAAACTCAAAGATCATTAGGTGCTGCATTGGCTGCTGGGCTTGCTGACTTTCACCAGGATGTTCATGACAGGGCCTTATTTTATTACAGGCTTCTTCAATACAATGCATCAGTGGCAGAGAGTGTGGTTAACCCTCCAAAGCAAGCAGTTTCAGTATTTGCTGATACTCAGAGCAGTGAAATCAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTGGTATACCAAAAGCCTTCTTATATGTTCACGGATAAAGAACACCGAGGGACCTTTGAGTTTGCAGATGAACTTGGAAATCTATCTATTAGTGCAGAATCTGGAGATTCTGTTGTTCCATCTCAGAGAGTGGAAGCAAATGACAAGGATCTGCTTCTAAGTACTTCAGAAAAAGATGAAGGAAGAGATCCTGGTAGCAATGGTTCTGTCTATAATGCTCCTTCCTATAATGGTTCATCTGCCCCTTCCACAACTTCACAACCACTTGCAGATTTGGCATTTCCAAGTACTGGCATATCTGGTCAAGCTCCAGCTTCTAGCTTGGCAATTGATGATCTGCTTGGTTTAGATTTTGCAGTTGGAACTGCAGCCACGCCCACACCTCCTCCATTGAACCTAAACCCCAAAGCTGCACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTGCCGATATCCTCAACTGAGGAATATTCACTAAGTCCTCAAGGAGTTGCATCGTTGACAAATCCTCATGCACTTCTGCGGCACATGCAAAGTCATTCAATACAGTGCATTGCATCCGGTGGTCAGTCTCCAAACTTCAAGTTCTTTTTCTTTGCTCAGAAAGCAGAAACCACATCATCATATCTTGTAGAGTGTGTAATCAACACATCGTCAGCCAAGTCACAGATTAAAATAAAAGCTGATGACCAGAGTTCATCCCAGGCATTCTCTACTTTATTCCAATCAGCCTTGTCCAAATTTGGTTTACCTTGA 2571 0.4263 MAPPPPQSHRSASPSQPSGKSEVSDLKSQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPSTLKHLLLNDPDTQVVANCLSALQEIWTLESSTSEEAARERETLLSKPLVYYLLNRIKEFSEWAQCLVLELVSKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLQLTMSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHVLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALTNAKFESSFVQVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQRSLGAALAAGLADFHQDVHDRALFYYRLLQYNASVAESVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELGNLSISAESGDSVVPSQRVEANDKDLLLSTSEKDEGRDPGSNGSVYNAPSYNGSSAPSTTSQPLADLAFPSTGISGQAPASSLAIDDLLGLDFAVGTAATPTPPPLNLNPKAALDPGTFQQKWRQLPISSTEEYSLSPQGVASLTNPHALLRHMQSHSIQCIASGGQSPNFKFFFFAQKAETTSSYLVECVINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2348 856 MobiDBLite consensus disorder prediction 636 692 - -
Aed7g2348 856 Pfam Adaptin N terminal region 35 563 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aed7g2348 856 Gene3D - 724 854 IPR012295 -
Aed7g2348 856 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 17 854 - -
Aed7g2348 856 MobiDBLite consensus disorder prediction 1 42 - -
Aed7g2348 856 MobiDBLite consensus disorder prediction 671 692 - -
Aed7g2348 856 MobiDBLite consensus disorder prediction 653 667 - -
Aed7g2348 856 PIRSF Beta_adaptin 11 856 IPR016342 GO:0015031|GO:0030276
Aed7g2348 856 MobiDBLite consensus disorder prediction 12 31 - -
Aed7g2348 856 Gene3D - 14 621 IPR011989 -
Aed7g2348 856 Pfam Beta2-adaptin appendage, C-terminal sub-domain 737 850 IPR015151 GO:0006886|GO:0016192|GO:0030131
Aed7g2348 856 SUPERFAMILY ARM repeat 29 610 IPR016024 -
Aed7g2348 856 SMART B2_adapt_app_C_2 734 851 IPR015151 GO:0006886|GO:0016192|GO:0030131
Aed7g2348 856 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 17 854 IPR026739 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2348 Aed-Chr7 25554664 25563405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2348 - - gmx:100801153 1566.21