Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2341 ATGCGCCCACCGGTTATTCTTAAAACTACTACCTCTCTCTCTGATTCTTATTCTTCACCCAGCGATCGCAGACTCAACACTCTCGCAAGACACTTCGTTCATCAAATGGCTTCTGACGACAGCATCTCCGCTTCGCCAACCGCTGCTTCCGATTCAATCTTCAATCACCTCGTTCGTGCTCCCGAAGATCCTATCCTCGGGGTAACTGTCGCTTTTAACAAAGATCCAAGTCCAATTAAGCTCAACTTGGGAGTTGGCGCTTACCGAACTGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTGAGGCGAGTCGAACAGCAACTCATAAATGACGTGTCACGCAACAAAGAATATATTCCGATTGTTGGGATTGCTGATTTTAATAAATTGAGTGCTAAGCTTATTTTTGGGGCCGAAAGCCCTGCTATTCAAGACAACAGGGTTGCCACTGTTCAATGCTTGTCTGGAACTGGTTCATTAAGAGTTGGGGGCGAATTTTTGGCTAAACACTATCACCAACGGACTATATACTTGCCAGCACCAACTTGGGGTAATCACATAAAGGTTTTCAACTTAGCGGGGTTGTCTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTTGATTTTCAAGGACTTCTAGAAGATCTTGGTTCTGCTCCATCTGGATCTATTGTTTTGCTACATGCATGCGCACATAACCCCACTGGTGTGGATCCAACCCTTGAGCAATGGGAGAAGATTAGGCAACTAATAAGATCAAATGCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGCGGAAGTCTAGATGCAGATGCCCAGCCTGTTCGTTTGTTTGTTGCTGATGGGGGTGAATTGCTGGTAGCACAAAGCTATGCAAAGAATCTGGGTCTTTATGGGGAACGTGTTGGCGCCTTAAGCATTGTCTGCAAATCAGCTGATGTTGCAAGCAGGGTCGAGAGCCAGCTGAAACTAGTGATTAGGCCCATGTATTCAAGTCCTCCCATTCATGGTGCATCCATTGTGGCTGCCATCCTCAAGGACCGTGATTTGTTCAATGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATCATCAATATGCGCCAAGAACTTTTTGATGCTTTACGTTCCAGAGACACACCTGGTGATTGGAGTCACATTATCAAACAGATTGGAATGTTTACTTTCACTGGATTGAATGCGGAACAAGTCACCTTCATGACTAAAGAGTTCCATATATACATGACATCTGATGGGAGGATTAGCATGGCTGGTCTGAGTTCCAGAACTGTCCCACATCTGGCGGATGCGATACATGCAGCTGTAACCCGAGTGGTCTAA 1365 0.4542 MRPPVILKTTTSLSDSYSSPSDRRLNTLARHFVHQMASDDSISASPTAASDSIFNHLVRAPEDPILGVTVAFNKDPSPIKLNLGVGAYRTEEGKPLVLNVVRRVEQQLINDVSRNKEYIPIVGIADFNKLSAKLIFGAESPAIQDNRVATVQCLSGTGSLRVGGEFLAKHYHQRTIYLPAPTWGNHIKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEKIRQLIRSNALLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNLGLYGERVGALSIVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLFNDWTIELKAMADRIINMRQELFDALRSRDTPGDWSHIIKQIGMFTFTGLNAEQVTFMTKEFHIYMTSDGRISMAGLSSRTVPHLADAIHAAVTRVV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2341 454 Gene3D - 113 354 IPR015421 GO:0003824
Aed7g2341 454 CDD AAT_like 81 434 - -
Aed7g2341 454 PRINTS Aspartate aminotransferase signature 259 271 IPR000796 GO:0006520|GO:0008483
Aed7g2341 454 PRINTS Aspartate aminotransferase signature 228 247 IPR000796 GO:0006520|GO:0008483
Aed7g2341 454 PRINTS Aspartate aminotransferase signature 327 352 IPR000796 GO:0006520|GO:0008483
Aed7g2341 454 PRINTS Aspartate aminotransferase signature 395 413 IPR000796 GO:0006520|GO:0008483
Aed7g2341 454 Gene3D Aspartate Aminotransferase, domain 1 59 446 IPR015422 GO:0003824
Aed7g2341 454 PANTHER ASPARTATE AMINOTRANSFERASE 51 453 IPR000796 GO:0006520|GO:0008483
Aed7g2341 454 MobiDBLite consensus disorder prediction 1 20 - -
Aed7g2341 454 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 297 310 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aed7g2341 454 SUPERFAMILY PLP-dependent transferases 52 452 IPR015424 -
Aed7g2341 454 Pfam Aminotransferase class I and II 79 446 IPR004839 GO:0009058|GO:0030170
Aed7g2341 454 PANTHER ASPARTATE AMINOTRANSFERASE 51 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2341 Aed-Chr7 25500914 25505333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2341 K14454 - gmx:547509 837.025