Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2338 ATGGTGATTCCCTTGGTGGAACGTGCCACGACCAGCATGCTCGTGGGCCCTGATTGGGCCATGAACATGGAGATCTGTGACATACTCAATCGTGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAGTTCCCAGAGTTCAAATTCTTGCACTGACTCTGCTGGAGACAATTGTAAAGAATTGTGGGGACATTGTCCACATGAATGTTGCCGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATAATCATGTCAAAGAGAAGATATTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGCGGGCCAAGGGCAAGATATCCACAGTATTATGGAGCATACCAGGAGCTTTTGCGTGCTGGGGCATCATTTCCTCATAGGTCTGAGCAATCTGCACCTGTATTCACACCACTACAAACACAACCATTGTCATCATACCCTCAAAATATACGAGACACTGTTTCTCGGCAAGACACAGCTGAATCCTCAGCCGAGTCCGAGTTTCCAGCCCTAAGTTTGTCTGAAATTCAGAATGCACTTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCATTAGACCCTGGTAACAAAGAAGGGCTTCAGCAGGAAGTTATTGTTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAATTCAACTTCGGATGAGTCACTGCTATGCCAAGGCCTATCTCTGAATGATGATCTGCAACGTGTCCTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTGCTTCATCAACTTCTGCTCAAGATCATACTGAGAAACTGAAGCCTGCACCTACTGGAGCACTTGTAGATGTTGATGATCCTTTGGTTGATATTAGAGATACTAGTAAACAAACAGATGTGAGATCGTCTTCTAGTGCTGAAGCTGGGTCTCAAACATGGAATCAGTTAATGCTTCCTGCACCCCCAACATCAAATGGATCTGCTCCCCCTGCAAAGGTTGATCCCAAAGTGGATCTGCTCAGTGGTGATGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTCGTTCCCCTAGGAGAACAGCAGCCAGTCAGCCCTATGTCTCAACAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAGCAATGCACCTACCTCTGTTAATACCCAGCCAATTAATGCTGCTGTCCAAACCAGTCCATTGGCTCCTCAATTTCAACAACAGCAGACTTTCATATCTCACGGGGTGTTTTACCCCAATGGAAGTGTGCCAAATGTGGGGTCACCTCGGTTTGAGCAATCCTCTTATATGCAGAGCACAGGTCCTTCCTGGAATGGTCAGGTTGCTCACCAGCAACAGCAACAGCAACAGCCTCCTTCACCAGTTTATGGTGTAGCAAGTGATGGATCATTTCCGCCACCTCCCTGGGAAGTGCAACCTTCAGACAATGATAGTCCAGTAGCAGGCAGTCAATACCCACAACAACCAATGCAAGTCACTCAAATGGTTATGACGCGTTTACAAAGTAGTGCACATCCTCAGGGACCTCAAGCAATGGGGCATGATCAGGCTGTTGGAATGTATATGCAGCCAAATGCTGGGCATATGTCAACCATCAATAACCTTGTTCAAAGCAATCAACTGGGCTTTTACCCGCAGCATATGCAGGGTGTTGCTGGTCCCTATATGGGTATGGTTTCACATCAAATGCCTAATAATAGTCCTGTGGCTTCCATGTATCCTCAACAGATGTATGGCAACCAATTTGGAGGATATGGCTATGGTCAGCAACCAGGGGTTCAATATATTGATCAGCAAATGTATGGTTTATCTATGAGAGATGATGGTGCTCTGAGAAATTCTTACCAGGCTTCTCCTACATCCTATGTGCCACCTGGGAAGCCTTCCAAGCCAGAAGATAAGTTATTTGGGGACCTTGTTACCATGGCAAGAGTGAAACCAAAACCTACTCCTGATCGAACTGGTAGCATGTAA 2037 0.4521 MVIPLVERATTSMLVGPDWAMNMEICDILNRDPGQAKDVVKGIKKRIGSKVPRVQILALTLLETIVKNCGDIVHMNVAERDVLHEMVKIVKKKPDNHVKEKILILIDTWQEAFGGPRARYPQYYGAYQELLRAGASFPHRSEQSAPVFTPLQTQPLSSYPQNIRDTVSRQDTAESSAESEFPALSLSEIQNALGIMDVLAEMLNALDPGNKEGLQQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLSLNDDLQRVLAKHESIASGTSASSTSAQDHTEKLKPAPTGALVDVDDPLVDIRDTSKQTDVRSSSSAEAGSQTWNQLMLPAPPTSNGSAPPAKVDPKVDLLSGDDYNSPKAETSLALVPLGEQQPVSPMSQQNALVLFDMFSNGSNAPTSVNTQPINAAVQTSPLAPQFQQQQTFISHGVFYPNGSVPNVGSPRFEQSSYMQSTGPSWNGQVAHQQQQQQQPPSPVYGVASDGSFPPPPWEVQPSDNDSPVAGSQYPQQPMQVTQMVMTRLQSSAHPQGPQAMGHDQAVGMYMQPNAGHMSTINNLVQSNQLGFYPQHMQGVAGPYMGMVSHQMPNNSPVASMYPQQMYGNQFGGYGYGQQPGVQYIDQQMYGLSMRDDGALRNSYQASPTSYVPPGKPSKPEDKLFGDLVTMARVKPKPTPDRTGSM 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2338 678 MobiDBLite consensus disorder prediction 440 477 - -
Aed7g2338 678 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Aed7g2338 678 SUPERFAMILY GAT-like domain 142 269 - -
Aed7g2338 678 Gene3D - 2 138 IPR008942 -
Aed7g2338 678 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Aed7g2338 678 PANTHER TOM1-LIKE PROTEIN 1 672 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aed7g2338 678 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Aed7g2338 678 CDD GAT_GGA_like_plant 188 266 - -
Aed7g2338 678 Pfam VHS domain 5 115 IPR002014 GO:0035091|GO:0043130
Aed7g2338 678 MobiDBLite consensus disorder prediction 265 344 - -
Aed7g2338 678 PANTHER TARGET OF MYB PROTEIN 1 1 672 - -
Aed7g2338 678 CDD VHS 5 132 - -
Aed7g2338 678 MobiDBLite consensus disorder prediction 265 282 - -
Aed7g2338 678 SUPERFAMILY ENTH/VHS domain 5 138 IPR008942 -
Aed7g2338 678 Gene3D - 180 277 IPR038425 -
Aed7g2338 678 Pfam GAT domain 196 268 IPR004152 GO:0035091|GO:0043130
Aed7g2338 678 MobiDBLite consensus disorder prediction 309 333 - -
Aed7g2338 678 MobiDBLite consensus disorder prediction 635 654 - -
Aed7g2338 678 MobiDBLite consensus disorder prediction 438 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2338 Aed-Chr7 25476532 25483648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2338 - - gmx:100805762 1136.32