Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2337 ATGCAGGCATCGCGGGCAAGGTTGTTCAAGGAGTACAAAGAAGTGCAGCGGGAAAAGTCTGCTGATCCTGATATTCAACTAGTTTGTGATGATTCAAACATTTTTAAATGGACCGCGCTTATCAAGGGACCCTCTGAGACTCCTTATGATGGGGGTGTGTTCCAGCTTGCCTTTTCTGTTCCGGAGCAGTATCCTCTACAGCCACCTCAAGTCCGGTTTTTGACTAAAATATTTCACCCAAATGTGCATTTTAAGACTGGGGAGATTTGCCTAGATATCTTGAAAAATGCTTGGAGCCCAGCTTGGACACTTCAATCTGTCTGTAGGGCCATAATTGCGTTGATGGCCCATCCAGAACCTGACAGCCCACTGAATTGTGATTCAGGCAATCTTCTGCGTTCAGGCGATGTTAGAGGGTACCAATCCATGGCAAGAATGTACACGAGACTTGCAGCAATGCCAAAGAAAGGCTGA 474 0.4641 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYDGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2337 157 Pfam Ubiquitin-conjugating enzyme 7 147 IPR000608 -
Aed7g2337 157 CDD UBCc 7 148 IPR000608 -
Aed7g2337 157 PANTHER BNAA09G04490D PROTEIN 3 157 - -
Aed7g2337 157 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 157 - -
Aed7g2337 157 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 3 153 IPR000608 -
Aed7g2337 157 SUPERFAMILY UBC-like 4 153 IPR016135 -
Aed7g2337 157 Gene3D Ubiquitin Conjugating Enzyme 1 152 IPR016135 -
Aed7g2337 157 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 94 IPR023313 -
Aed7g2337 157 SMART ubc_7 6 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2337 Aed-Chr7 25472330 25475254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2337 7 123 Miscellaneous Gene Families AT3G17000 34.711 3.54e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2337 K10689 - sind:105164758 325.094