Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2195 ATGTCTCTGCGTGTGGCGGCAGCAAAATTGCTAAAAAAACTTCGCTTTCCTGCTTCCAATGTCTTCCCTGCCTCTACAGTAACCAAAAATGCATTTTCCGCTAAACTCAAACTTACCCGTTGGTATCAAACTGGTGCACATGGCTGGATGATAGATCTTAGGGATCCTTTTCTATGGATTGTTATATCTGGACATGTAGGAATTAGTGCCAGCATGGTATTTGCAGAAGATGCAACAACTGAAGCATCTTCCGATAGTGACTTAATCGGATTAAAAAAAATTGAGGATGGCTCTGTAGTATCAAACATACATACAGCAAAATGGAGAGTCTTTACAGATAAAGCCAGAGATTTTTTTCTACAGGCATGCTGTTTCTTTGTTATTAAGTTCTATTATACAACTCACCTAATGGGAAAAAGGTTGTTTTTGTTGTTGTTGACTATTTATCTCTCCATTTTCTGCCAGGGAAAACTGGATGAAGCTGAAAAACTGTTCCTTTCTGCTATACAAGAAGCTAAAGAAGGTTTCGGCGAGAAAGATCCACATGTTGCTTCTGCATGCAACAATCTGGCAGAATTATACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCATTGTATTTGGAAGCTATCAACATATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGCTGCTGTTCACAACCTTGGGCAGTTCTACCTTGGGCAGCGGAAGTTGGAAGAAGCTCATGTTAGCTATGAGCGTGCTCTGAAGATAAAAAGGCGTGTTTTGGGGTATGGCCATTCAGAATGTTCAGATACATTGTATCATCTAGGAGTGGTGCTGTATCTTCAAGGAGAAGAAAGGGATGCTGAGGCCCTTATTAAGGACTCTATAAGGATTCTAGAGGAAGGTGGTGAAGGGGAGTCTTTTGTATGCATTAGAAGACTACGATACCTCTCACAGATATATATGAAGTCACATCGAGTTGCTGAAGCTGAAATGGTCCAGAGAAAGATCCTGCATGTTATGGAATTGTCAAAGGGATGGAATTCCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTAACCCTGCAAGCATCTGGCAATACAAAAGATTCAAAAGAGCTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCTAGTGACCATATTCAGATAGGTGCAAATTTACTTCATCTAGGAAGAGTGACAATGCTTGACTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCAAAGAATCATTTGCATAATTCCATAAGGATTTCACGTCAATGTTTAGAAAAGGTATTGAAACAAAAGGACAAGTTAAAGAAATACAGTAGGCCTGGAGATTCTAGAAAGGAAGGGCAAGTAGCACTGGCCATATTGTTGCAGTCACTCAATACATTGTCATCAGTGGAGTTAGATAAGCAAGAATTGCAGGAAATTCAGGAAAGAGATATTAACCTCAAGGCTCGGGAGGCACTTCTTCAATGCATTTCTGCTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAACGAGTATCTTTCATGTTTAAAGCGCGCACAAGATTTGTTTGGTCATAAAGTTGACGAAGAGCCAAGCAATCAAACACCTTGA 1665 0.4024 MSLRVAAAKLLKKLRFPASNVFPASTVTKNAFSAKLKLTRWYQTGAHGWMIDLRDPFLWIVISGHVGISASMVFAEDATTEASSDSDLIGLKKIEDGSVVSNIHTAKWRVFTDKARDFFLQACCFFVIKFYYTTHLMGKRLFLLLLTIYLSIFCQGKLDEAEKLFLSAIQEAKEGFGEKDPHVASACNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGAAVHNLGQFYLGQRKLEEAHVSYERALKIKRRVLGYGHSECSDTLYHLGVVLYLQGEERDAEALIKDSIRILEEGGEGESFVCIRRLRYLSQIYMKSHRVAEAEMVQRKILHVMELSKGWNSLDTVIAAESLALTLQASGNTKDSKELLERCLNVRKDLLPSDHIQIGANLLHLGRVTMLDCSQHKKLDVSRAKAELDMAKNHLHNSIRISRQCLEKVLKQKDKLKKYSRPGDSRKEGQVALAILLQSLNTLSSVELDKQELQEIQERDINLKAREALLQCISAYKEFVHKRSIADTPEIKNEYLSCLKRAQDLFGHKVDEEPSNQTP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2195 554 Gene3D Tetratricopeptide repeat domain 143 344 IPR011990 GO:0005515
Aed7g2195 554 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 545 - -
Aed7g2195 554 SUPERFAMILY TPR-like 265 402 IPR011990 GO:0005515
Aed7g2195 554 Pfam Tetratricopeptide repeat 356 391 - -
Aed7g2195 554 SUPERFAMILY TPR-like 153 287 IPR011990 GO:0005515
Aed7g2195 554 SMART tpr_5 352 385 IPR019734 GO:0005515
Aed7g2195 554 SMART tpr_5 226 259 IPR019734 GO:0005515
Aed7g2195 554 SMART tpr_5 184 217 IPR019734 GO:0005515
Aed7g2195 554 SMART tpr_5 268 301 IPR019734 GO:0005515
Aed7g2195 554 Pfam Tetratricopeptide repeat 185 257 - -
Aed7g2195 554 Gene3D Tetratricopeptide repeat domain 347 456 IPR011990 GO:0005515
Aed7g2195 554 ProSiteProfiles TPR repeat profile. 226 259 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2195 - - gmx:100813040 897.501