Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2187 ATGGCCATGCGCTTTCTTCTGCTTCTTTTTGCAGTATATGTTGCTGCTATTGATGAAGAACCATTTATAGGGGCGAATATTGGAAGAGATCTCTCAGATATGCCACACCCCACTCAAGTAGTAGCACTACTTAAAGCCGAGCAAATTCGGCATGTTAGGTTGTATGATGCTGATCAAGCTATGCTCATTGCTCTTGCAAACACAGGAATTCAAGTTGTTGTGTCTGTCCCTAATCAAGAGATCCTAGCAATTGGTCAATCAAATACCACAGCTGCAAAATGGGTTTCCCATAATGTGATAGCACATTACCCTGCCACTAACATAACTACTATTTGTGTTGGCTCTGAGGTCTTAACTACTCTCCCCTATGCAGCAAAAGTGCTTGTCAGCGCCCTTAAGTTCATTCATTCAGCACTTGTGGCATCCAATCTTGATCACCAAATCAAGGTTTCAACACCCTTTTCCTCTTCCATGATCCTTGATTCATTTCCACCTTCACAAGCCTTCTTCAACCGCTCGCTGAATTCAGTCCTGGTTCCAATGCTTGATTTCTTGCAAACCACAGGCTCTTATCTCATGCTCAACGTTTACCCTTACTATGACTACATGAAGTCCAATGGTGTGATTCCATTGGACTATGCACTCTTCAAACCTCTCCCTCCAAACAAAGAAGCCATTGACTCCAACACCCTTCTCCACTACTCGAATGTGTTTGACGCTGTGGTTGATGCAGCATACTTTGCCATGGCTTTTCTCAATTACACTAACATCCCTGTGGTGGTGACAGAAACAGGATGGCCCTCAAAAGGTGAATCTAATGAACCAGATGCAACAGTAGAAAATGCCAACACTTACAACAGCAATTTGATCAAGCATGTTCTTAACATAACTGGGACTCCCAAACACCCAGGAATTGGTGTTAGTACTTACATCTATGAGCTCTACAATGAGGATGCAAAGGAAGGGCCATTGTCAGAGAAAAACTGGGGCTTGTTTGATGCAAATGGGAAACCTGTTTATGTTTTACACTTGACAGAATCAGGAGGAGTGTTGGCAAATGACACAACCAATCAAACTTACTGTGTTGCAAAGGATGGTGCTGATCCTAAGATGCTGCAGGCTGGAATAGATTGGGCATGTGGACCTGGCAAGGTGGATTGCTCTCCTTTGTTGCAAGGGCAACCATGTTATGAACCAGACAGTGTGGTTGCACATGCAAATTATGCTTTTGACACTTACTATCATCAGATGGGAAAGTCTCTCCAGTCATGTGATTTCAATGACATGGCTACAATCTCCACCAACAATCCAAGTCATGGACCATGTGTATTTCCAGGAAGTCTTGGCAACAATGGCACCTTCCCCAACGTCACGTTATCATCATTGAATTCCACAAATTCAGAGTCTTCTGCCTGCAATCTGCATCGTGGTGAATTGGGAATTAGAAGCATTCTAATGGTGATGATAGTACTTCTACTATGGGGAGTTCTTTTGCTATAA 1500 0.4313 MAMRFLLLLFAVYVAAIDEEPFIGANIGRDLSDMPHPTQVVALLKAEQIRHVRLYDADQAMLIALANTGIQVVVSVPNQEILAIGQSNTTAAKWVSHNVIAHYPATNITTICVGSEVLTTLPYAAKVLVSALKFIHSALVASNLDHQIKVSTPFSSSMILDSFPPSQAFFNRSLNSVLVPMLDFLQTTGSYLMLNVYPYYDYMKSNGVIPLDYALFKPLPPNKEAIDSNTLLHYSNVFDAVVDAAYFAMAFLNYTNIPVVVTETGWPSKGESNEPDATVENANTYNSNLIKHVLNITGTPKHPGIGVSTYIYELYNEDAKEGPLSEKNWGLFDANGKPVYVLHLTESGGVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGQPCYEPDSVVAHANYAFDTYYHQMGKSLQSCDFNDMATISTNNPSHGPCVFPGSLGNNGTFPNVTLSSLNSTNSESSACNLHRGELGIRSILMVMIVLLLWGVLLL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2187 499 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 6 479 - -
Aed7g2187 499 SUPERFAMILY (Trans)glycosidases 23 343 IPR017853 -
Aed7g2187 499 SMART X8_cls 359 444 IPR012946 -
Aed7g2187 499 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Aed7g2187 499 Gene3D Glycosidases 22 349 - -
Aed7g2187 499 Gene3D - 353 443 - -
Aed7g2187 499 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Aed7g2187 499 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 479 IPR044965 GO:0004553|GO:0005975
Aed7g2187 499 Pfam X8 domain 360 431 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2187 Aed-Chr7 24412192 24415562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2187 18 490 Glycoside Hydrolase AT1G66250 72.421 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2187 K19891 - gmx:100811077 914.45