Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2144 ATGGAGGAACCAAGCCCGTGCTTCTGCAACCCTGCAATTTTGGATTCTCTCACTCACGATTCGGTGCACGAAATTCTCGACAGCTACAATGGTTTCTGCAACGCTACGCAATCCCTTCTCTCCGGTAACGGCGATCTCTCTGTCAGTACCGACTTCGTTTCTCACGTTCACACTCTCTGCAGGCACACTCTCCATTCCCTTGTTCAAGATCACTTTTTTCAACTTCTCGAGGAGACGTTTGAACAAAATGGGGCATCGAGATTTTGGCGCCATTTTGATCCCTATTCTCATGTTGCGGGTTTGAAAAAGAACGATGACCTTGATATTGATGAGGATGAGATTCAGAGTGTGTTGCATAATGCTTTGGAAGAGATTACTTTAGAGAAACAATATCAAGAAAAGTGTCTGTTGAAGTTGGTGCATGCTTTGCAATCTTACAAGGACCAGTTGTCAGAGGATAATCATGGTTTTGAAGGAGAAAGAACTTACCTCACCTCTAAGTATCAATGGATTGTCTCTTCTGTACTTATGGCCACGCTTCCTTGGCATTTCCCTGTTATACTGCATTGGCATTTTAAAAGAAAACTGGAGGAGTTGAGTACAATTATGGATGGAGAGTTCGGTGATGATGCATCTCAAAATAAGGATGGCATGGATTTAGATGAAAAAGGAAAAATATGTAACAAAGTTGGTGAAATGGATGTTGATGAGTGCTATAACGACCATAGGTTCTCGGAAAACAGTAGACTTGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCATGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTATATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAATCTATTAAAAGCTGGATACAGGCTGTTCCTCTTCAGTTTCTGCATGCGCTTCTTGTCTATCTTGGTGATGTCATTAGTTATGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAACCATCGTCATGCTGTCCTGGAATTGATACTCCCTCTGAAGGGATTGTGAGATGGAAGTTGCGGCTGGAATATTTTGCGTATGAAACACTACAAGATTTAAGAATAGCCAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCAGCACTGCGTTATCGCTTGCTTACTGCAGGCGCATCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAGCACTTAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGGGATTATTTAAGAGGAAGGAGAGATACCATAAAGTGCATAGTAACCATGCTGACAGATGGGACTGGTGCACATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCATGCGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCCGAGAAACTTCTAAATAAATCAGATTATGATATTGATTCAGAGATACGTACTCTAGAACTCCTTAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAACCAATAGTAACATTAAAGCTACCATAAATCAGCCATCTCAGACAAGTGTTGAAGTGCGTGACAGTGCAATATCCATGGATGTAATTTCTGCTACTATCTTATCTTCAAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAACCTGTTGATCAGCTCCTATCTGATTATGCAAAGAGATTTAATGAAATCAAAACTCCCCGTAAGCTGCAGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAATTTCAAGATAGGGAAATGCAATTCACAGTAGCCCCTGTTCATGCATCTATCATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAACCTTGCAGCTGCTATTGGGATACCTGCAGATGTTATAAATCGGAGAATAAATTTCTGGATAAGCAAGGGAATCATTGCAGAATCGCGAGGGGCAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGCTGAGACAAGTAAGAATGGAGCCAGTACTGGTGCTCAGGAACTTCTAGGAGGTGAAGAGGAGGAAGAGAGATCTGTGGCCTCTGTGGAAAATCAACTTCGTAAGGAAATGACTGTTTATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGACCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCGCCGTATGACAAGTCACTCCAGCAACTACAAAGCTTTTTATCTGGACTAGTCTCTGAGGAGAAGTTAGAACTCCGGGATGGAATGTACTTTCTAAAGAAGTAG 2655 0.4087 MEEPSPCFCNPAILDSLTHDSVHEILDSYNGFCNATQSLLSGNGDLSVSTDFVSHVHTLCRHTLHSLVQDHFFQLLEETFEQNGASRFWRHFDPYSHVAGLKKNDDLDIDEDEIQSVLHNALEEITLEKQYQEKCLLKLVHALQSYKDQLSEDNHGFEGERTYLTSKYQWIVSSVLMATLPWHFPVILHWHFKRKLEELSTIMDGEFGDDASQNKDGMDLDEKGKICNKVGEMDVDECYNDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVYDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDVISYESTSSGLKSPLAPQPSSCCPGIDTPSEGIVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGAHSSSSGNPGDSLLEELNRDEEIQENAGVDDDFNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQPSQTSVEVRDSAISMDVISATILSSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLQWKKSLGTIKLELQFQDREMQFTVAPVHASIIMKFQDQPSWTSKNLAAAIGIPADVINRRINFWISKGIIAESRGADSSDHVYTIVENMAETSKNGASTGAQELLGGEEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2144 884 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
Aed7g2144 884 SUPERFAMILY Cullin homology domain 526 779 IPR036317 -
Aed7g2144 884 SMART APC2_2 823 882 IPR014786 -
Aed7g2144 884 SMART cul_2 549 706 IPR016158 -
Aed7g2144 884 Pfam Cullin family 547 752 IPR001373 GO:0006511|GO:0031625
Aed7g2144 884 PANTHER BNAC04G32030D PROTEIN 14 884 - -
Aed7g2144 884 Gene3D Cullin; Chain C, Domain 2 644 786 - -
Aed7g2144 884 Gene3D Cullin Repeats 527 630 - -
Aed7g2144 884 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 14 884 IPR044554 -
Aed7g2144 884 SUPERFAMILY "Winged helix" DNA-binding domain 813 883 IPR036390 -
Aed7g2144 884 Pfam Anaphase promoting complex (APC) subunit 2 823 880 IPR014786 -
Aed7g2144 884 Gene3D - 799 884 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2144 Aed-Chr7 23965107 23972865 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2144 K03349 - gmx:100785428 1650.57