LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g2139	ATGTTAAGCTTCTATGACCAATCCTCTTGTGTAGACTCTACCAAGCACAACTACTATAAGTCACAGCCTCTGGTCACAAGCCACCTAGCACTGAATTTGCAACTGAAGTACTTCAACCTTATCCTTCTCTCTACAACTCCAAACACAAGAACATCATCCATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAACTCTTTTGAACCTGAATGGGTCTGGAGCAGGAGCTTCAGGTCCCAGTTCAGCCTTCTTTGGGACAAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCGAACAGCAAGGTTTCCTCTGGAAGCAGCTTCAAGATTGTGGCTGCAGCAGAACCGCAGGAGATTGAAGAGAGCCAGCAGACCGACAAGGACAGATGGAGGGGTCTGGCCTACGATATTTCAGATGACCAACAAGACATCACAAGAGGGAAGGGTATGGTTGATTCCCTCTTCCAAGCTCCTCAGGATGCTGGAACTCACTTTGCTGTCATGAGCTCTTATGAGTACCTTAGCACTGGACTTAAACAGTACAACTTGGATAACAACATGGAAGGTTTTTACATTGCTCCTGCTTTTATGGACAAGCTTATTGTTCACATCACCAAGAACTTCATGACCCTCCCCAACATTAAGGCATGCATGTTCTGTGTTCCTCTGATTCTTGGTATCTGGGGAGGTAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCGATCATGATGAGTGCTGGAGAGTTGGAAAGTGGGAACGCAGGAGAGCCAGCAAAGTTGATAAGGCAGAGATACCGTGAAGCCGCGGACATGATAAAGAAGGGAAAGATGTGCGCTCTGTTCATCAACGATCTTGACGCAGGAGCTGGTCGTCTTGGTGGAACAACACAATACACAGTGAACAACCAGATGGTGAACGCCACACTGATGAACATCGCTGATAACCCGACAAATGTGCAGCTTCCCGGTATGTACAACAAGGAAGACAACCCACGTGTCCCCATCGTTGTCACCGGTAACGATTTTTCAACACTCTATGCTCCTCTCATCCGTGATGGCCGTATGGAGAAGTTCTACTGGGCACCAACAAGAGAAGACCGTATTGGTGTCTGCATTGGTATTTTCCGCACTGATGGTATTGCCGAACAGGACATTGTCAAGATTGTTGACACTTTCCCCGGCCAATCCATCGATTTCTTTGGTGCACTGCGGGCAAGAGTATACGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTCGAGGGTGTTGGGAAGAAGCTTGTGAACTCAAAAGAAGGACCTCCTACCTTTGAGCAGCCCAAGATGACTCTGGAGAAGCTCTTACATTATGGAAACATGCTTGTCCAAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCTGACAAGTACTTGAACGAGGCTGCTCTTGGAAATGCTAACGAGGATGCTATTAAGAGGGGAACTTTCTAA	1503	0.4731	MLSFYDQSSCVDSTKHNYYKSQPLVTSHLALNLQLKYFNLILLSTTPNTRTSSMAASVSTVGAVNRTLLNLNGSGAGASGPSSAFFGTSLKKVIASRVPNSKVSSGSSFKIVAAAEPQEIEESQQTDKDRWRGLAYDISDDQQDITRGKGMVDSLFQAPQDAGTHFAVMSSYEYLSTGLKQYNLDNNMEGFYIAPAFMDKLIVHITKNFMTLPNIKACMFCVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRTDGIAEQDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVEGVGKKLVNSKEGPPTFEQPKMTLEKLLHYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKRGTF	500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g2139	500	PANTHER	ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	54	500	-	-
	Aed7g2139	500	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	223	397	IPR027417	-
	Aed7g2139	500	Pfam	ATPase family associated with various cellular activities (AAA)	228	369	IPR003959	GO:0005524\|GO:0016887
	Aed7g2139	500	Gene3D	-	373	485	-	-
	Aed7g2139	500	Gene3D	-	183	372	IPR027417	-
	Aed7g2139	500	PANTHER	-	54	500	IPR044960	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g2139	Aed-Chr7	23943874	23947427	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g2139	-		-	ccaj:109792417	818.92