Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2089 ATGCCAAAAGGGATGACTTCAGTCACCACATTTTCAGTAATGTTCTTAATATTGTGTTCTTCGTTTGGTCAGCTAAGCTTAGCTTTCACATCGGAAGAGTACCAAGAGGCTCTAGAGAAATCCATTCTCTTCTTCGAGGGGCAACGATCTGGAAAATTACCTTCCAACCAGCAACAAACATGGAGGGGAGATTCTGGATTGTCCGATGGCTCTTCTTATCATGTGGACCTGGTAGGTGGTTATTATGATGCTGGAGACAACGTCAAGTTTGGACTGCCAATGGCTTTTACCACCACATTGTTAGCATGGAGTGTCATTGAATTTGGAAGCTCAATGCAGAACCAGATTGAAAACGCCAGAGCCGCTATACGGTGTTGGGAAAGGCCAGAAGATATGGACACTCCACGCAACGTGTATAAGGTGTCAGCTCAAAACCCAGGATCAGATGTAGCAGCAGAGACTGCAGCTGCATTGGCAGCTTCTTCAATAGTGTTCAGAGATTCGGATCCCAGCTATTCCTCCAAATTGCTTCAAGCAGCCATCGAGGTATTCAATTTTGCAGACCGTTACAGGGGTTCTTATAGTGACTCTCTTAATTCGGTTGTCTGTCCATTCTACTGCTCTTACTCTGGATACCATGATGAGCTTCTGTGGGGTGCATCATGGATTTATAAAGCCTCGGGAATCAGCTCTTACATACAATACATACAATCCAATGGCCACATATTAGGCGCTGATGACGATGGTTATACCTTCAGTTGGGATGACAAGCGACCCGGAACAAAAATCCTGCTTTCCAAGGAATTCCTGGAGAAGAATTCTGAAGAGTTCCAATTATACAAAGCACATGCAGACAACTACATATGTTCACTAATGTCGGGAACACCCGGTTTCCAGGCTCAGTACACCCGAGGAGGGCTTCTGTACAAAGGGAGTGAGAGCAATTTGCAGTACGTGACATCGACGAGCTTCCTTGTGTTGACATACGCCAAGTATCTGAACGGAAACGGGGGCGTTGTCCGCTGTGGGACTTCAGGAGTCACGGGCGAAAAGCTAGTAACACTAGCGAAAGCACAAGTGGACTACATTTTGGGGAAGAATCCAACAAAGATGTCTTATATGGTGGGTTTTGGGGAGAGGTATCCGAAGCATATCCACCACAGGGGTTCCTCTCTGCCTTCGATTAACGCACATAATGAACACATTTCATGCAACGAGGGGTTTGAGTATTTCCATTCAGGATCAGCAAATCCAAATGTCCTTGTCGGAGCCATAGTAGGTGGTCCTGATAACAACGACAACTTCTCTGATGATCGACATAACTATCAGCAGTCTGAACCAGCCACATACATCAATGCGCCATTTGTAGGTGCTCTTGCCTATTTCTCCGCCCAACCAACAACAACAACACGCTATTAG 1419 0.4588 MPKGMTSVTTFSVMFLILCSSFGQLSLAFTSEEYQEALEKSILFFEGQRSGKLPSNQQQTWRGDSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMQNQIENARAAIRCWERPEDMDTPRNVYKVSAQNPGSDVAAETAAALAASSIVFRDSDPSYSSKLLQAAIEVFNFADRYRGSYSDSLNSVVCPFYCSYSGYHDELLWGASWIYKASGISSYIQYIQSNGHILGADDDGYTFSWDDKRPGTKILLSKEFLEKNSEEFQLYKAHADNYICSLMSGTPGFQAQYTRGGLLYKGSESNLQYVTSTSFLVLTYAKYLNGNGGVVRCGTSGVTGEKLVTLAKAQVDYILGKNPTKMSYMVGFGERYPKHIHHRGSSLPSINAHNEHISCNEGFEYFHSGSANPNVLVGAIVGGPDNNDNFSDDRHNYQQSEPATYINAPFVGALAYFSAQPTTTTRY 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2089 472 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 362 388 IPR018221 -
Aed7g2089 472 Gene3D - 29 471 IPR012341 GO:0005975
Aed7g2089 472 PANTHER ENDO-1,4-BETA-GLUCANASE 124 465 - -
Aed7g2089 472 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 435 453 IPR033126 -
Aed7g2089 472 PANTHER ENDOGLUCANASE 4 12 124 - -
Aed7g2089 472 Pfam Glycosyl hydrolase family 9 124 459 IPR001701 GO:0004553|GO:0005975
Aed7g2089 472 PANTHER ENDOGLUCANASE 4 124 465 - -
Aed7g2089 472 PANTHER ENDO-1,4-BETA-GLUCANASE 12 124 - -
Aed7g2089 472 SUPERFAMILY Six-hairpin glycosidases 32 467 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2089 Aed-Chr7 23554067 23556183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2089 31 463 Glycoside Hydrolase AT1G02800 60.738 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2089 - - gmx:732658 867.455