Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2044 ATGCCGACGCCCGTAGCAGCCGCGCGGCAATGCCTAACCCCGGACGCCGCGCGCGCCCTCGACGAGGCTGTCTCCGTGGCGCGGCGGCGCGGGCACGCCCAGACGACGTCCCTCCACGCCGTGTCCGCCCTGCTCTCCCTCCCGTCCTCACCGCTCCTCCGCGACGCCTGCTCCCGCGCCCGCAACTGCGCCTACTCCCCGCGCCTCCAGTTCAAGGCCCTCGACCTCTGCCTATCGGTCTCCCTCGACCGCGCCCCCTCCTCACATAACCACTCCTCCGCCGACCACGACCCCCCCGTTTCAAACTCCCTCATGGCCGCCATCAAACGCTCCCAGGCCAACCAGCGTCGTCACCCTGACAATTTCCACTTCTACCCCCATCAGACACACCAACACCAGAACCCGAACCAGAACCAACAGCAACAACCGTTTTCTGTTTCCTCTGTCAAAGTTGAGCTCCAGCATTTGATCCTCTCTATCCTAGACGACCCGGTCGTCAGCCGCGTCTTCGCCGAGGCCGGCTTCCGGAGCTCTGACATCAAACTCGCCATTCTCCGCCCTCTCCGCCCCCGCGGCCCCCCGATTTTCCTCTGCAACTTGTCCGAGCCGCCGCGCCGGTTCCCGTTCTTCTTCGGAGGCGCCGAGGACGACGGCGGCGGAGAGAATTTCCGGCGAATCGGGGAGGTTCTTGTCCGCAGCCGAGGGAAGAATCCGCTGCTTCTCGGCGCGTGCGCGGACGAGGCTCTCCGTAGCTTCGCGGAGGCCGTGGAGAAACGGAGAGAGGGGGTTTTGCCGGTGGAGTTGCTGGGACTGCGCGTGGTTTGCATTGCGGAGGAGGTGGCGAGTGGGGATAAGGAGGTGGCGAGTAGGCGCGTGAGGGAGATTGGGAATCTGGCGGAGCAGTGTGTGGGGCCCGGTATTGTGTTGAGTTTCGGGGACTTGAAGGGGTTTGTTAGCGTCGACGATGAAGAAGGTGGCGAGGGTTTGAGAAGTGTGGTGGGGGAATTGGCCAAGTTGTTGCAGCTTCATTATGATAAGTTTTGGTTGATGGGTGCTGCTGCTACTTACGAGACTTACTTGAAATTCCTCGCCAACTTTCCTTCTATAGACAAAGACTGGGATTTGCAGCTTCTTCCTATTACCTCTGTTAAGCCTCCTCCTCCTTCACAAACCTATCACCGTCCCAAGTCCAGCTTAATGGATTCATTTGTACCGTTTGGTGGCTTTTTTTCGTCACAGTCTGATTTGAAAGCTCCACTGAGTGGCTCTTTCTATTGTGTTCCCCAATGTCACCAGTGTGGGGAAAGGTGTGAACATGAAGTCCTTGCTGCTTCCAAGGAAAGGTTTTCTGCTTCTTCAGCTGCTGATCCGCATCAGTCTAGCTTGCCTCCGTGGCTGCAGATTGAAGAATTGAATGTTAAGACCAAAGATAATGGTGTTTTGCTCGACAGTAATGAATCTGGGCCACTGCATAAGAACTTCGACACGTTATCCCAGCATTTGCACCAGCGAGATGCAAATACTTTTCCAACTGTTGTGGGTTTTCATTGTGGTGCTGACAAGAAAAAGGAAGATGCTGACAATTGCAGCAGCAAATCACCTAGTGAATACATCAATCTCAACTCCCATGTACCCGTTGGCATGCAAATGATGCCTACATCACAATCAAGTAGTCCTTTTCCTGCAGTTTTCAAGGCAAAGCAGGAGAAATATAATTCAAAACTTGCTGAGATGTTCCAGAAAGTGGAAGATCACGAGTCAGGTGACCGAAGATCATGCAACATGTCCAATTCAAGTGTGTGTGATGGTAGTCAAATGTCTCCGACGTCTGTAACTTCTATAACCACAGATCTTGGGTTAGGAATATGCTCATCTCCTACCAGCAATAAATTGAAGAAACCTGCTGTTCAGTATACAATGGAGCCTCCAAAGGAAATCCCAAGTCGATTCTCTCCAAACTTCAATTTGGCTGATGGGAATATCTTGAAGCATCCGTCCCAGTCTTCATCCTGCTTAAGTTTTGACTATTGTGGACAAGTTGATGCGAAAAATCCCAAAATTCTTTTTGAAGCTCTTTCCAAGGAGGTAAGCTGGCAAGATGAAGCTTTACGGGCTATTGTCAAAACAATAGTTTGCAGCCCAACAAAAAGGGTTATGCACCGTGGAGCAAATCAGCCTGGAGACATCTGGATGAATTTTGTTGGACCTGATAGGCTTGGTAAAAAGAAAGTTGCTGTTTCTCTAGCTGAGATATTGTATGGGAGCCGGGAAAGCTTTATTTTTGTGGATCTAAGTTCTGAAGAAATGAAAGGATGCAATGCAAAATTCAGAGGGAAGACTACCCTTGATTTTATTGTAGGGGAGTGTTGCAAGAAACCCCTGTCTGTGGTTTTCCTTGAAAATATAGACAAGGCAGATATTCTAGCTCAAAATAGTTTGTCTCAAGCCATCAAGACAGGAAAAATTACAGACTCAAATGGACGAGAAGTTAGTGTAAACAATACAATGTTTGTTTTTTCTTTCTCAGATTACCAAAATAGTTTGGTGCCAACAAGGGAACCTTCCAACTATTCTGAGGAAAGAATACTGAGGGCGAAAGGGGGAGGTATCAAGATAAAGGTTGAACATGTGATTGGAGACATCAGAAGCCAAAGCATGGTTGTAACTAACAATTCAATAGATGCTATTCCTAATCTAAATTTTCTAAACAAACGAAAGTTGATTGGTGACATTGAATTTCATGATCAACATTTACTCTCTGAGACCGCTAAAAGGGCGCATACAACATCAAATTGGCTGTTAGATTTGAATCTCCCAGCAGAAGAGAATGAACAGAAACAAAAAGATGATGGAAACTCTGAACATGTGTCAACTGAGAACCAAAGCCTTTGGTTGCAAGATTTGTGTGATCTGGTTGATGAAACAGTCGTTTTTAAACCTTATGATTTTGATGCACTTGCAGATGTAGTGTTGAAAGTGATCAGAAGTAACTTCAACAAAATTCTTGGATCCGAGTGTGCATTGCAGATCCAGACAGAAGTCATGGACCAGTTTCTTGCAGCTCAATATGTCTCAGACAGTGATACGGAGGTGGAGAACTGGGTGGAAGAAGTTCTATGTGAAGGATTTTCAGAAATACAGAGAAGGTACAACCTCACTGCTAGTTCTATTGTAAAACTTGCTACGTGTCCTGAGCAAGCTGCTGGTGTACACCTTCCCCCAAGGATAATTTTAGACTGA 3240 0.4858 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLPSSPLLRDACSRARNCAYSPRLQFKALDLCLSVSLDRAPSSHNHSSADHDPPVSNSLMAAIKRSQANQRRHPDNFHFYPHQTHQHQNPNQNQQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGPPIFLCNLSEPPRRFPFFFGGAEDDGGGENFRRIGEVLVRSRGKNPLLLGACADEALRSFAEAVEKRREGVLPVELLGLRVVCIAEEVASGDKEVASRRVREIGNLAEQCVGPGIVLSFGDLKGFVSVDDEEGGEGLRSVVGELAKLLQLHYDKFWLMGAAATYETYLKFLANFPSIDKDWDLQLLPITSVKPPPPSQTYHRPKSSLMDSFVPFGGFFSSQSDLKAPLSGSFYCVPQCHQCGERCEHEVLAASKERFSASSAADPHQSSLPPWLQIEELNVKTKDNGVLLDSNESGPLHKNFDTLSQHLHQRDANTFPTVVGFHCGADKKKEDADNCSSKSPSEYINLNSHVPVGMQMMPTSQSSSPFPAVFKAKQEKYNSKLAEMFQKVEDHESGDRRSCNMSNSSVCDGSQMSPTSVTSITTDLGLGICSSPTSNKLKKPAVQYTMEPPKEIPSRFSPNFNLADGNILKHPSQSSSCLSFDYCGQVDAKNPKILFEALSKEVSWQDEALRAIVKTIVCSPTKRVMHRGANQPGDIWMNFVGPDRLGKKKVAVSLAEILYGSRESFIFVDLSSEEMKGCNAKFRGKTTLDFIVGECCKKPLSVVFLENIDKADILAQNSLSQAIKTGKITDSNGREVSVNNTMFVFSFSDYQNSLVPTREPSNYSEERILRAKGGGIKIKVEHVIGDIRSQSMVVTNNSIDAIPNLNFLNKRKLIGDIEFHDQHLLSETAKRAHTTSNWLLDLNLPAEENEQKQKDDGNSEHVSTENQSLWLQDLCDLVDETVVFKPYDFDALADVVLKVIRSNFNKILGSECALQIQTEVMDQFLAAQYVSDSDTEVENWVEEVLCEGFSEIQRRYNLTASSIVKLATCPEQAAGVHLPPRIILD 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2044 1079 CDD AAA 733 832 - -
Aed7g2044 1079 MobiDBLite consensus disorder prediction 592 606 - -
Aed7g2044 1079 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1078 - -
Aed7g2044 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 688 996 IPR027417 -
Aed7g2044 1079 Pfam AAA domain (Cdc48 subfamily) 731 840 IPR003959 GO:0005524|GO:0016887
Aed7g2044 1079 MobiDBLite consensus disorder prediction 584 606 - -
Aed7g2044 1079 Pfam Clp amino terminal domain, pathogenicity island component 151 185 IPR004176 -
Aed7g2044 1079 Gene3D - 10 187 IPR036628 -
Aed7g2044 1079 Gene3D - 669 878 IPR027417 -
Aed7g2044 1079 ProSiteProfiles Clp repeat (R) domain profile. 8 193 IPR004176 -
Aed7g2044 1079 PANTHER PROTEIN SMAX1-LIKE 8 1 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2044 Aed-Chr7 23182114 23186833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2044 - - gmx:100800606 1889.77