Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2030 ATGGCGAACGTGGATGAACTGTTATCTTCCTTAATCTCAGACATCCACGCCTACACCGGAAAAGACCCTCTTCTTCCCTGGCTTCGCGCGATCCGAAAGATGAAGGACACTCTTCCTCCCAAAACCCTAAAGGAAAAACTGCCCGCGTTTTTGCAGAAATGCGCCCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATCTTCGAGTTTGGCTCCATCTGATGGATTTCGTGGATGATCCAAAATCAGTTTTAAGAACCATGGAAGCTAATCACATCGGAACCAAACGTTGTGAATTCTTCCAAGCGTATGCTCTTTACTACGAGAAGACCAAGAAGTACGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCAGAAATCGTATGAACAATTTCTTCAACGGATGGAGCGAAAAAATAATAAGAGAATCCAGCATCAGGAAGCAAAAGCTGCCAGGAGGCCACTGTCTTCAAAGAGCTTCCCTTCTCTCGACAACAAGACTGAGGGAAGCAAAAGCAATGGAGCATGCTGTGTTGAGGGTGTAGCTGATGATAAAAATATAAAGACTAAGAAGGATGAGCGCAAGAGATTTCGTGGTGACGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGAGAGCCATTGGAGACTGTTCCATTACGCAGGAAATCTCATAAAAACAATTCAAAAGAAGATCGTAGTACAAAGAACGAGTTTGAGGTTTTTGTCGATGAAAACTTAGATCATGGAATCAAACCATCCGGTTCCATGTCACTTCAGAACAGGACTGAAGCTAGCCAATCTCACCAAGAACCGCTCCAGATATACATGGATGATGAAGAAATTTCCGAGACAAGTGATGTGAATTTGTCTGAAGGTTTTACTTCATCGGCTTCGCAACCAAATGGCTTTGTTTTTCTCCGTCCCAAGGATATTCCTTCTGAAAAATCTAGTGATATGGATGGTGAAAGCGCTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTGGCAGATTTGTTGGTTCCGCCATTTTGGATGAACCAGAGGTGGAAAATGCTTGCCACCACGGTTTAGTAGACCCCACCATCAATTTGAAGGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAAGAACCACCACCAAGCAGGAGAAAGCCCCCCAGAGCAATAAGGGAAATGACTTTGGTGGGTTTTCAATCCTTGCTGATGATGAGCACATGGAACAACAAGTTCCACCACCACCACCAAAATTGCAAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTATACTCACAAAGGAAGTCATGGACGATATAAACCAGATGTTTAACATGCCTCTGAATTTTTAG 1524 0.4337 MANVDELLSSLISDIHAYTGKDPLLPWLRAIRKMKDTLPPKTLKEKLPAFLQKCAHTFELDRRYRNDMRYLRVWLHLMDFVDDPKSVLRTMEANHIGTKRCEFFQAYALYYEKTKKYDEAEKMYHLGVKNLAEPLDKLQKSYEQFLQRMERKNNKRIQHQEAKAARRPLSSKSFPSLDNKTEGSKSNGACCVEGVADDKNIKTKKDERKRFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLRRKSHKNNSKEDRSTKNEFEVFVDENLDHGIKPSGSMSLQNRTEASQSHQEPLQIYMDDEEISETSDVNLSEGFTSSASQPNGFVFLRPKDIPSEKSSDMDGESARNSKFREDTVVGRFVGSAILDEPEVENACHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRRTTTKQEKAPQSNKGNDFGGFSILADDEHMEQQVPPPPPKLQGKSKESDLFEPTILTKEVMDDINQMFNMPLNF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2030 507 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Aed7g2030 507 MobiDBLite consensus disorder prediction 435 481 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 359 374 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 334 350 - -
Aed7g2030 507 PANTHER OS11G0128700 PROTEIN 4 507 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 297 319 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 300 319 - -
Aed7g2030 507 Coils Coil 135 162 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 331 374 - -
Aed7g2030 507 MobiDBLite consensus disorder prediction 154 185 - -
Aed7g2030 507 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Aed7g2030 507 Gene3D - 9 166 - -
Aed7g2030 507 SMART mad3_bub1_i 4 128 IPR013212 -
Aed7g2030 507 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 507 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2030 Aed-Chr7 23066328 23068718 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2030 - - gmx:100806627 931.013