Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1998 ATGGCCTTCTATGGAGTGGCTTCGAACTTAGTGAATTACCTGACAAGCCAACTTCATGAAGACACAGTTTCATCAGTGAGGAATGTGAATAACTGGTCAGGATCTGTGTGGATTACGCCAATTCTTGGAGCTTGCATAGCAGATTCTTACTTGGGTCGCTTCTGGACTTTCACTCTCTCATCTCTCATTTATGTCTTGGGAATGACTCTTCTGACAGTAGCTGTGTCACTGAAGAGGCTGAGGCCAACATGCAGCAACGGCATATGCAACAAGGCATCAACCTCACAAACAGCATTTTTTTACACAGCCCTTTACACAATGGCAATTGGGGCAGGTGGAACAAAGCCCAACATCTCAACCTTTGGTGCTGACCAATTTGATGACTTCAATCCCAATGAAAAACAGCTCAAGGCCTCCTTTTTCAACTGGTGGATGTTTACCTCTTTCTTGGGTGCTTTGATTGCCACTTTAGGATTGGTTTACATTCAAGAGAACTTGGGTTGGGGACTTGGCTATGGAATCCCCACTGTTGGTCTTCTTTTCTCTTTGCTCATTTTCTATTTAGGCACACCAATGTATCGCCACAAAGTTAGGACTACCAAAACTCCTGCTAGGGACATCATTCGTGTACCAATTGAAGCCTTCAGGAATAGAAAACTTCAACTCCCTACTAACCCCGAGAATCTCTATGAGCACAACCTCCAACATTATGTTAATAGTGGCAAACGCCAAGTCTATCACACTCCAACTCTCAGGTTTTTGGACAAGGCTGCTATTAAAGAGGACAGTGCTGGTTCCGGTTCCTCGAGAGTACCATTGACAGTAACACAAGTTGAAGGAGCTAAGCTTATCTTTGGTATGGTACTTGTATGGCTAGTTACACTGATTCCCAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACCACTTTGGACAGAAACCTTGGTCCTAATTTTAAAATTCCATCAGCCTCTCTTGGAAGCTTTGTGACACTCTCCATGCTACTCTCAGTGCCAATATATGACCGGTTTTTCGTGCCGTTCATGCGCCAGAAAACCGGCCACCCTAGAGGAATCACATTGCTCCAAAGGCTTGGCATTGGATTTTCAATCCAGATAATAGCCATTGCAATGGCCTATGCAGTAGAAGTTAGAAGAATGCATGTGATAAGTGCAAACCATGTGGCTGGTCCTAAAGATATTGTCCCTATGAGCATATTTTGGCTAATGCCTCAGTATGTACTAATAGGGATAGCAGATGTGTTCAATGCGATTGGATTGCTAGAATTCTTCTATGATCAATCCCCTGAAGACATGCAAAGTCTTGGAACTACATTCTTCACTAGTGGGATCGGTGTTGGGAACTTCTTGAACAGCTTTTTGGTGACAATGGTTGATAAAATAACAGGAAGGGGTGACAGAAAGAGCTGGATAGGGGACAACTTGAATGATTGTCACTTGGACTACTATTATGGGTTTTTGTTGGTCATGTCAAGTCTTAATATGTTGGTTTTTCTTTGGGTTTCAAGTAGATATATTTATAAGAGGGAATCAATAAGGGTCAAGGAGGGCCTTTGTGTTCAAATGGAGCCAAACCCAACTTTGGACGCTTCTCTTGGTTTACAATTACAAGTGTGA 1650 0.4291 MAFYGVASNLVNYLTSQLHEDTVSSVRNVNNWSGSVWITPILGACIADSYLGRFWTFTLSSLIYVLGMTLLTVAVSLKRLRPTCSNGICNKASTSQTAFFYTALYTMAIGAGGTKPNISTFGADQFDDFNPNEKQLKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTVGLLFSLLIFYLGTPMYRHKVRTTKTPARDIIRVPIEAFRNRKLQLPTNPENLYEHNLQHYVNSGKRQVYHTPTLRFLDKAAIKEDSAGSGSSRVPLTVTQVEGAKLIFGMVLVWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPNFKIPSASLGSFVTLSMLLSVPIYDRFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAMAYAVEVRRMHVISANHVAGPKDIVPMSIFWLMPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMVDKITGRGDRKSWIGDNLNDCHLDYYYGFLLVMSSLNMLVFLWVSSRYIYKRESIRVKEGLCVQMEPNPTLDASLGLQLQV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1998 549 Pfam POT family 54 482 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed7g1998 549 Gene3D MFS general substrate transporter like domains 1 525 IPR036259 -
Aed7g1998 549 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed7g1998 549 SUPERFAMILY MFS general substrate transporter 31 513 IPR036259 -
Aed7g1998 549 CDD MFS_NPF5 1 518 IPR044739 GO:0042937|GO:0042938|GO:0071916
Aed7g1998 549 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 1 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1998 Aed-Chr7 22844912 22848376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1998 1 542 Organic Solute Cotransporters AT2G40460 72.110 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1998 - - gmx:100815188 1033.86