Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1996 ATGCTTTGCGTCAACACCGCCTTCACCTCTTTCTTACCCAGAAAATCAACTTCCGTTTTTTCCACCAAATCAACCGCCCCAATTTCCTGCACCCTCCAAGGAACTGTTGCTGAACCAAAATCTACAGCTGCTGCTGAACCGCTTTTGCTTAATGCAGTTCGTGGGATAGATGTTGAAAGACCCCCAGTTTGGCTCATGAGGCAAGCAGGGAGATCTAATTTGTCAACCTTTATTTACCAGAGTTATCAAACCATCTGTGAGAAATATCCTTCATTCCGTGAAAGATCTGAAAATGTTGATCTCGTGGTGGAAATTTCTCTGCAACCGTGGCTTGTTTTCAAGCCTGATGGAGTGATTTTATTCTCAGACATTCTTACCCCACTTTCTGGAATGAATATACCCTTTGATATTGTGAAGGGTAAGGGTCCTGTCATATTTGATCCAATTCACACAGCTTCCCAGGTCAATCAAGTGAGGGAGTTTATTCCTGAAGAATCAGTTCCATATGTTGGTGAAGCACTGACAATTTTGAGGAAAGAGGTCGGACTGGTGGATAATAAAGCTGCAGTCCTTGGTTTTGTTGGGGCACCATTCACCCTGGCATCATATGTGGTTGAAGGTGGTTCATCAAAAAACTTCTCAAAAATAAAAAGATTGGCTTTCTCTGAATCCAAGATCCTGCACTCATTACTGCAGAAGTTTACAACATCAATGGCAAGATACATTCAATACCAAGCTGACAATGGAGCTCAAGCTGTTCAGATATTTGATTCATGGGCAACAGAGCTTAGTCCAGTGGATTTTGAAGAATTCAGTTTGCCTTACTTGAAGCAGATTATTGATACTGTGAAGAAAAGCCATCCAAAACTCCCTTTGATCCTCTATGCAAGTGGGTCTGGGGGTTTGCTTGAAAGACTAGCTTTGACAGGCGTGGATGTTGTGAGCTTGGATTGGACAGTTGATATGGCCGACGGTAGGAGGCGACTGGGACCGAATATAGCTGTTCAGGGGAACGTTGACCCTGGTGTTCTCTTTGGTTCAAAAGAGTTCATCACTGATCGGATAAATGATACTGTTAGAAAAGCAGGTAGAGGAAAACATATCTTGAATCTTGGTCATGGCATTAAAGTAGGTACGCCTGAGGAGAATGTTGCACATTTTTTTGAGGTTGCTAAATCAATCAGATACTAA 1191 0.4249 MLCVNTAFTSFLPRKSTSVFSTKSTAPISCTLQGTVAEPKSTAAAEPLLLNAVRGIDVERPPVWLMRQAGRSNLSTFIYQSYQTICEKYPSFRERSENVDLVVEISLQPWLVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHTASQVNQVREFIPEESVPYVGEALTILRKEVGLVDNKAAVLGFVGAPFTLASYVVEGGSSKNFSKIKRLAFSESKILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIIDTVKKSHPKLPLILYASGSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNIAVQGNVDPGVLFGSKEFITDRINDTVRKAGRGKHILNLGHGIKVGTPEENVAHFFEVAKSIRY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1996 396 CDD URO-D 50 393 IPR006361 GO:0004853|GO:0006779
Aed7g1996 396 Gene3D - 35 396 IPR038071 -
Aed7g1996 396 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 2, CHLOROPLASTIC 18 396 - -
Aed7g1996 396 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 191 207 IPR000257 GO:0004853|GO:0006779
Aed7g1996 396 Pfam Uroporphyrinogen decarboxylase (URO-D) 48 393 IPR000257 GO:0004853|GO:0006779
Aed7g1996 396 TIGRFAM hemE: uroporphyrinogen decarboxylase 49 392 IPR006361 GO:0004853|GO:0006779
Aed7g1996 396 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 62 71 IPR000257 GO:0004853|GO:0006779
Aed7g1996 396 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 18 396 - -
Aed7g1996 396 SUPERFAMILY UROD/MetE-like 48 395 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1996 Aed-Chr7 22833513 22838238 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1996 K01599 - gmx:100817154 729.939