Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1979 ATGTCGCCAAAATATCAGATTCTTGACAATCGCTCCGTTCATCAGTGGAAAGTTACAGAGCTGAGAGATGAGCTGAAGAGGAGGAAGTTAAGTACCAAGGGTTTGAAGGATGATTTGGTCAGGCGTTTGGACGAAGCCCTTCGCCTTGAAAGGGATGTGGATTCTGAGAAGGAGGAGGCCAATGGTTTTGATGGTCACAGGGGAAAAAATTTGGAGACGGTTACTGTTGATGCTAAAATGGTTGATCCAACTGACAGGGACAGTGCCAAAACATTTGTGTCTGCTGAAAAGGGGAAGAGTGGTGTAGTCGAACCAATTGAAATAGAAAATGTGGAAAAGATTCTGGAGGTTGTCGGTCATGAAAGCAATAAGAAAGAAAAGCAGGATGGCGGTGCCATCCAGGTTGACATTACTAATAGTGTGTCAACCATGGATCAAGAAGCTGAACATAAGGACTTGCCAGCTGGTGGAGGTTCGGCAAATGTGGGAGAGGAGGCAATTCCCCATGCTTCTACTGTGGAGACCGCCATTACAGTCACTGAGAGTATAGTGACAGAAGTAGTAGCCAGTGGTGAGGATTCTTATCGTGCAGAAAAGAATAATGAGGATTCAGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGTGCAGCTGGATGGTGAGGACACAAAGCCCCAACTGGATTGTGACACCAAGCCCTTGCACGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTATTAAGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATATTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATATCAATAATGTTTCAAGTCCAGACTTGAACAAGACCAATAGCAGTGATGATGTGGGGTATCCAGAAAAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTGCCTGAGAGTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAGAGACAAAGTAGAGAGTATTGAAGAGCCTGTTGTGAAGGAGGAAAGTATTACTATAGCTGTTGGAGATGGTCTGTCTGCAGGAAAAAGTGATACCCACCAAGATATTGACATTAGTCCTGTGGCCTCAACTGAGAAACGAAAATTTCATGAGCAAGCATCAGTTGGGAACAGTGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACCAAGCACTACTCCTAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTCTGAAACGCAGCCTGTCTAGGTCTGATTCCGCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCATCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTCCTCCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACATACTCGTCCATGGAAGAAGCCATTGAGACACGAAATGCTGTGTATAATTTGCAATGGCCGCCAAATGGTGGGCGTCTCTTAGTTGCCGAGTATGTTGATCCTGAAGAAGTGGAAATGAAGTTAGAACCTCCTCCTACTCAGGCTCCTCCTGTCAGCACCGCTCCAGCAGTTCCTCCTGCACCCCCGTCCTCACAGCCAGAGCCTTCCCCCCGTCTGCACAGGGAGCAGCATCCAGTTCCAGCTGCTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTTCCCGAGAAAGTTGATCCACCTATTGTCACTCTGGATGATCTCTTCCGCAAAACCACAGCAACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAGGTTGGAGCAAAACTTGCAGCACAGGGTAAAAGTGTGAGGCAGTAG 2118 0.4547 MSPKYQILDNRSVHQWKVTELRDELKRRKLSTKGLKDDLVRRLDEALRLERDVDSEKEEANGFDGHRGKNLETVTVDAKMVDPTDRDSAKTFVSAEKGKSGVVEPIEIENVEKILEVVGHESNKKEKQDGGAIQVDITNSVSTMDQEAEHKDLPAGGGSANVGEEAIPHASTVETAITVTESIVTEVVASGEDSYRAEKNNEDSAAKLENEESKVQLDGEDTKPQLDCDTKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIIKPEMVEEPSSRNDVPVSYDESHSMDIGGLHEKKASVEENINNVSSPDLNKTNSSDDVGYPEKLNLDRSSGDDSMEEDLPESKQIDSKFNVDELRDKVESIEEPVVKEESITIAVGDGLSAGKSDTHQDIDISPVASTEKRKFHEQASVGNSEPAKRQRRWNTETVKGPDAPSTTPRPATTPRDEPIALKRSLSRSDSAATDDTPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSMEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVEMKLEPPPTQAPPVSTAPAVPPAPPSSQPEPSPRLHREQHPVPAALPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVGAKLAAQGKSVRQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1979 705 Gene3D SAP domain 13 60 IPR036361 -
Aed7g1979 705 SUPERFAMILY RNA-binding domain, RBD 504 590 IPR035979 GO:0003676
Aed7g1979 705 MobiDBLite consensus disorder prediction 189 274 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 143 173 - -
Aed7g1979 705 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 702 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 74 96 - -
Aed7g1979 705 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 702 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 293 382 - -
Aed7g1979 705 SMART sap_9 13 47 IPR003034 -
Aed7g1979 705 MobiDBLite consensus disorder prediction 595 620 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 589 667 - -
Aed7g1979 705 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Aed7g1979 705 MobiDBLite consensus disorder prediction 631 663 - -
Aed7g1979 705 Pfam RNSP1-SAP18 binding (RSB) motif 660 702 IPR032552 -
Aed7g1979 705 MobiDBLite consensus disorder prediction 409 512 - -
Aed7g1979 705 Pfam SAP domain 15 47 IPR003034 -
Aed7g1979 705 MobiDBLite consensus disorder prediction 192 238 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 480 496 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 242 274 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 331 351 - -
Aed7g1979 705 SUPERFAMILY SAP domain 13 50 IPR036361 -
Aed7g1979 705 CDD RRM_ACINU 510 594 IPR034257 -
Aed7g1979 705 MobiDBLite consensus disorder prediction 353 382 - -
Aed7g1979 705 MobiDBLite consensus disorder prediction 74 93 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1979 K12875 - gmx:100786288 1120.53