Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1977 ATGCGGTGGCGGTTGCTGCTTTCGTTGCTCTTGCTGTTGCTGGAGCTAACGGCTCGCGCAATGCCGGTTCCGATCACGTTCTCCGCGCGCCTCGTTCACCGCTTCGCCGACGAAATGAAACCAGTTCGGACTCCGACCGGCGTCTGGCCGGACCGCCGGAGCATCCGCTACTACCAGATGCTTCTCACCGGCGACATTCTGAGGCGCAAGATCAAAGTTGGAGGCACACGCTACCAGCTACTGTTTCCTTCTCACGGTAGCAAAACGATATCGCTCGGCAACGACTTCGGCTGGTTACATTACACGTGGATTGATATAGGAACACCGAGTACTTCGTTTCTCGTGGCGTTGGATGCAGGGAGTGATCTTCTTTGGATTCCGTGTGATTGCGTACAGTGTGCTCCATTGTCATCGAGTTACTATTCCAATCTGGATAGAGATCTGAATGAGTATAGTCCGACTCGGTCGTTATCCAGTAAGCGTCTATCTTGCAGTCATCGGTTGTGTGATAAGGGTTCGAATTGTAAAACTTCCCAGCAGCAGTGTCCGTACATGGTTAGTTACTTGTCGGAGAACACTTCGAGTTCTGGATTGTTAGTTGAGGACATACTGCATCTTCAGTCAGGTGGCAGTTTATCAAACTCGTCTGTTCAGGCTCCAGTTGTTCTTGGTTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGCCTATTAGGTTTGGGCCCTGGGGAGAGTTCAGTTCCAAGTTTTCTTGCTAAATCAGGATTAGTCCATGATTCTTTTTCTCTGTGCTTTAATGAAGATGATTCTGGTGGAATATTTTTTGGGGACCAGGGACCAACCATCCAACAATCTACTTCATTCTTGCCTTTGGATGGAATATATTCAACCTACATTATTGGAGTGGAGTCATGTTGTATTGGGAATTCTTGTCTTAAAATGACGAGTTTTAAAGCACAGATTGATAGTGGGACGTCATTTACATTTCTTCCTGGCCATGTGTATGGAGCAATAGCTGAGGAGTTTGATCAACAAGTAAATGGTTCAAGATCTAGCTTTGAAGGATCTCCTTGGGAGTATTGTTATGTTCCCAGTTCCCAAGAGTTGCCAAAGGTTCCCAGCTTAACTCTCACGTTCCAACAGAATAACAGTTTTGTGGTCTATGATCCTGTGTTTGTATTCTATGGCAATGAGGGAGTCGTTGGATTTTGTTTAGCTATACAGCCAACTGAAGGAGATATGGGAACAATTGGACAGAACTTCATGACAGGATACCGTTTGGTGTTTGATAGGGGAAACAAGAAGCTAGCGTGGTCACGCTCAAATTGTCAGGATCTGAGTCTAGGTAAGAGGATGCCCCTTTCTCCAAACGAGACTTCATCAAACCCATTGCCTACAGATGAGCAACAAAGAACGAACGGGCATGCAGTTGCTCCAGCTGTTGCCGGAAGAGCTCCCCACAAACCTTCAGCTGCTCCATCTCGTATGATTTCATCATGCCGGGTACATTGCAACTGCTATTTGTTTCTTCTACTTCTATTTGTGTCTGCCTTTTACTGA 1575 0.4654 MRWRLLLSLLLLLLELTARAMPVPITFSARLVHRFADEMKPVRTPTGVWPDRRSIRYYQMLLTGDILRRKIKVGGTRYQLLFPSHGSKTISLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWIPCDCVQCAPLSSSYYSNLDRDLNEYSPTRSLSSKRLSCSHRLCDKGSNCKTSQQQCPYMVSYLSENTSSSGLLVEDILHLQSGGSLSNSSVQAPVVLGCGMKQSGGYLDGVAPDGLLGLGPGESSVPSFLAKSGLVHDSFSLCFNEDDSGGIFFGDQGPTIQQSTSFLPLDGIYSTYIIGVESCCIGNSCLKMTSFKAQIDSGTSFTFLPGHVYGAIAEEFDQQVNGSRSSFEGSPWEYCYVPSSQELPKVPSLTLTFQQNNSFVVYDPVFVFYGNEGVVGFCLAIQPTEGDMGTIGQNFMTGYRLVFDRGNKKLAWSRSNCQDLSLGKRMPLSPNETSSNPLPTDEQQRTNGHAVAPAVAGRAPHKPSAAPSRMISSCRVHCNCYLFLLLLFVSAFY 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1977 524 MobiDBLite consensus disorder prediction 453 478 - -
Aed7g1977 524 Pfam Xylanase inhibitor C-terminal 322 444 IPR032799 -
Aed7g1977 524 ProSiteProfiles Peptidase family A1 domain profile. 100 444 IPR033121 -
Aed7g1977 524 PANTHER ASPARTYL PROTEASES 10 465 IPR001461 GO:0004190|GO:0006508
Aed7g1977 524 Gene3D Acid Proteases 88 282 IPR021109 -
Aed7g1977 524 PRINTS Pepsin (A1) aspartic protease family signature 420 435 IPR001461 GO:0004190|GO:0006508
Aed7g1977 524 PRINTS Pepsin (A1) aspartic protease family signature 324 335 IPR001461 GO:0004190|GO:0006508
Aed7g1977 524 PRINTS Pepsin (A1) aspartic protease family signature 106 126 IPR001461 GO:0004190|GO:0006508
Aed7g1977 524 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 10 465 - -
Aed7g1977 524 Pfam Xylanase inhibitor N-terminal 101 282 IPR032861 -
Aed7g1977 524 Gene3D Acid Proteases 283 450 IPR021109 -
Aed7g1977 524 SUPERFAMILY Acid proteases 94 449 IPR021109 -
Aed7g1977 524 MobiDBLite consensus disorder prediction 453 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1977 Aed-Chr7 22699993 22703710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1977 93 451 Miscellaneous Gene Families AT1G44130 26.702 1.04e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1977 - - gmx:100782209 1014.99