Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1964 ATGGCAACCCAAACGAGTCTCTTCTTCCTCTTCCTTTTTCTGCTCTCGCTATGCTTCTTCGGAACAGTTAGATCGGACGAGGATTGTGTCTACACGGTGTACGTTCGGACGGGTTCGATCATCAAGGGGGGAACCGATTCAATAATTGGGCTGAAGCTATACGACAACTACGGCTACGGCATATACATCAAGAACCTCGAGGCATGGGGCGGGTTAATGGATCCGGGTTACAACTACTACGAGCGGGGCAATCTCGACATTTTCAGCGGCAGAGGCCCTTGCTTGCAAGGACCCGTTTGCGCTGCCAATCTTACTTCTGACGGGTCGGGGTCCCATCACGGCTGGTACGTCAACTACGTGGAGGTCACCACCACTGGGGTCCACGCGCCTTGCTCTCAGCAGCAGTTCACCATTGAGCAGTGGCTCGCCACGGATACGTCGCCGTATGAGCTCTGGGCTCTCAGAAATAACTGTCCAAACAACTTGGCCCAGGCCCACCACATCACCGATGTAGTCAAATCTCGGCCCGGTTTCTCTATTCTGGAATCCACCGTCCGCGAGAGGTTGATCTTCCACAATGTCTTCCCTTCAACTGTTGCAACTAACAAGGCATGGCCAGAGAAAACTTTATTACTTGCATCTGGTATATTAATTGCTGGTGGAACAGCTGCATACATGCAATCAAGGTTTAGAGTTAATAAACATGATTTATTTGGCTATTGCAATGGACACAACAATGATGAAGAAGTCCTGGAGGAGGAGGTTGTGAAGGTCGTTAATGCACCAAAAAATAAACAAAAGAAAGGGTTGAAGTCACTCCAAGTTCTTGCTGCAATTCTACTATCTAAGATTGGCAAATTTGGTACAATGGATCTCTTAGGTTTAGTTGCCATAGCGGTGCTGCGAACTACTTTGAGCAACAGGCTAGCTAAAGTGCAAGGCTTCCTATTTCGTGCTGCTTTTCTTCGACGTAACATGGTGTATTACAAAATATCGCATGTTGATGGTCGTATAACTAACCCAGAGCAAAGAATTGCCAGTGATGTGCCAAGGTTCTGTTCGGAGTTGAGTGAAATTGTACAGGATGATCTAACAGCAGTTACCGATGGACTTTTATACACTTGGCGGTTGTGTTCATATGCTAGCCCAAAATATGTCGTCTGGATATTGGCTTATGTAATTGGAGCCGGTGCTACAATCAGAAACTTCTCTCCTTCATTTGGAAAACTTATGTCCAAAGAGCAGCAATTGGAAGGAGAGTATCGACAGCTTCACTCACGATTAAGGACTCACTCAGAAAGCATAGCATTCTATGGTGGAGAGAGGAAAGAAGAAACTCATATTCAACAGAAGTTTAAAACCTTGGTTAGGCACGTGCATAATGTGCTACATGACCATTGGTGGTTTGGCATGATTCAGGACTTATTATTGAAGTACCTTGGTGCTACTGTTGCTGTTATTTTGATTATTGAACCTTTCTTTTCTGGTCATCTAAGGCCTGATAGTTCAACATTAGGGCGTGCAGAGATGTTAAGCAATCTTAGATATCATACCAGTGTCATAATTTCCTTATTTCAGTCTCTAGGAACTCTTTCTATCAGTGCAAGACGGCTGAATCGTCTCAGTGGGTATGCTGATCGCATTTATGAATTAATGGCTGTATCAAGGGAGCTAAGCTTGGTGGATGAGAAATCTATCCTTCAAAGAAATGCAAGTAGAAATTGCCTAAGTGAAGCTAACTACATTGAATTTGATGGTGTCAAGGTTGTAACACCCACTGGTAATGTCTTGGTGGATGATCTGACTCTTAGGGTTGAATCAGGATCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAAAGCTCCCTTTTCAGGGTTCTAGGTGGTCTTTGGCCATTGATATCTGGACATATTGTGAAACCAGGAATTGGCTCTGATCTTAATAAGGAGATTTTCTATGTGCCGCAAAGGCCATACACTGCTGTAGGAACACTTCGAGATCAGTTGATTTATCCTCTTACTGCAGATCAAGAGATTGAACCACTCACAGATCGTGGGATGGTGGAGCTGTTAAAAAATGTTGACCTTGAATACCTGTTGGACCGTTACCCACCTGAAATGGAGGTAAACTGGGGTGATGAACTGTCATTGGGTGAGCAACAGAGATTGGGCATGGCAAGACTTTTCTATCATAAGCCTAAATTTGCAATTCTAGATGAGTGCACGAGTGCTGTTACTACTGATATGGAAGAACGGTTTTGTGCTAAAGTTAGGGCCATGGGAACATCATGCATTACCATATCACATCGTCCAGCATTGGTTGCATTTCACGATGTGGTTTTATCCTTAGATGGTGAAGGAGGATGGAGTGTTGATTACAAAAGGGAGGAGGGCTCTTCTACTGAAATGGGGATTGATACAATGAAGGCATCAGAAACAAAACGACAGAGTGATGCAAAGGCAGTTCAACTTGCATTTTCCATGAGCAAAAAGGATGCATTCTCGAATCCAAAGGCACAGTCATATTTTGCGGAGGTGATATCATCATCTCCATCTACGAATCATACAATTTCACCATCTGCTGTTCCCCCACTCCGTGGTAATACAAGGGTATTGCCATTGAGAGTAGCTGCCATGTGTAAAGTATTGGTACCCACTGTACTTGATAAACAAGGTGCACAACTGCTTGCTGTCGCTTTTCTTGTCGTTTCAAGAACATGGGTCTCAGATCGTATTGCATCACTAAATGGTACCACTGTGAAGTTTGTTTTGGAGCAGGATAAAGCTTCCTTTATTCGGTTAATTGGTTTAAGTGTTCTTCAAAGTGCTGCATCTTCTTTCATTGCTCCTTCTATAAGGCACTTGACAGCCAGGCTGGCCCTGGGGTGGCGGATTCGTTTGACGCAACATTTGCTAAAAAACTACTTAAGAAACAATGCATTCTACAAGGTCTTTCACATGGCAAACAAAAATATTGACGCGGATCAGAGGATAACTCACGACTTGGAGAAGAGACTTGTCTGGATTGGTCACCGGAATGGTCAGAGGGGGGTTGCCATACTCTATGCTTACATGTTACTTGGTCTGGGATTTTTAAGAACTGTTACTCCTGATTTTGGTGATTTGATAAGCCAAGAACAACAACTTGAAGGAACCTTTAGGTTCATGCATGAAAGACTCTGTACTCATGCTGAATCCATTGCTTTCTTTGGAGGTGGAGCTCGAGAAAAAGCTATGGTTGAATCAAGATTCAGTGAGCTTCTCTCCCACTCTAAATACCTTCTAAAAAAGAAGTGGCTGTTTGGTATACTGGATGATTTTATCACAAAGCAACTCCCTCATAATGTGACATGGTTGCTGAGCTTATTATATGCTATGGAACATGAGGGAGACCGCGCTTTAATAAGTACTCAGGGTAGGATTGTTGGACTGTTCTCAGTTACTCTCTTTATCACCCTCTTGCCCCCCACTGACATGCTGTACTATCTTACAGGTGAGCTGGCACATGCATTGAGGTTCTTAGCATCTGTTGTTTCTCAAAGCTTTTTAGCTTTTGGCGATATTCTTGAATTGAACAGAAAGTTTGTAGAGCTTTCTGGTGGTATTAATCGGATTTTTGAGCTTGAAGAACTTCTGGATGCAGCACAATCTGGGGACTCCATCAATGGTAGTATTACATCACCAATATGGGATTATCATGGTAAAGATGCTATTTCATTTTCTAAGGTTGATATTGTAACCCCTTCCCAGAAGATGTTGGCCAGGGAGTTGACGTGTGACATTGAGCTTGGTAAAAGCCTGCTTGTTACTGGTCCAAATGGAAGTGGAAAAAGTTCCATTTTCAGAGTTCTTAGAGGACTTTGGCCAATTGTGAGTGGAAGACTCTCTAGACCATCTGAGGATGTGGATCAAGAGGCTGGATCAGGTTGTGGCATCTTCTATGTTCCTCAGCGGCCTTACACATGCTTGGGAACATTGCGGGATCAAATTATATACCCATTGTCCCGTGAAGAAGCAGAGTTTAGAGCATTGAAGATGCATGGAAAAGGTCAAAAACATTCTGACCCTAGAAAAGTGTTGGACACACACTTGCAAGTTATCCTAGAGAATGTTCGGTTGAATTATCTTCTAGAAAGAGACAACAATGGCTGGGATGCAAAACTAAACTGGGAAGACATTCTCTCTCTTGGAGAACAGCAGAGATTAGGCATGGCGCGTTTGTTCTTCCATAAGCCTAAATTCGGTATCCTGGATGAGTGTACCAATGCAACTAGCGTTGATGTTGAAGAACACCTATATGGGCTTGCGAACAAGATGGGGATCACATTTGTTACTTCCTCTCAACGTCCTGCTTTAATACCATTTCATTCCATGGAATTGCGTCTGATTGATGGTGAGGGAAATTGGGAACTTCGTATGATCAAGCAATGA 4434 0.4339 MATQTSLFFLFLFLLSLCFFGTVRSDEDCVYTVYVRTGSIIKGGTDSIIGLKLYDNYGYGIYIKNLEAWGGLMDPGYNYYERGNLDIFSGRGPCLQGPVCAANLTSDGSGSHHGWYVNYVEVTTTGVHAPCSQQQFTIEQWLATDTSPYELWALRNNCPNNLAQAHHITDVVKSRPGFSILESTVRERLIFHNVFPSTVATNKAWPEKTLLLASGILIAGGTAAYMQSRFRVNKHDLFGYCNGHNNDEEVLEEEVVKVVNAPKNKQKKGLKSLQVLAAILLSKIGKFGTMDLLGLVAIAVLRTTLSNRLAKVQGFLFRAAFLRRNMVYYKISHVDGRITNPEQRIASDVPRFCSELSEIVQDDLTAVTDGLLYTWRLCSYASPKYVVWILAYVIGAGATIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFYGGERKEETHIQQKFKTLVRHVHNVLHDHWWFGMIQDLLLKYLGATVAVILIIEPFFSGHLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISARRLNRLSGYADRIYELMAVSRELSLVDEKSILQRNASRNCLSEANYIEFDGVKVVTPTGNVLVDDLTLRVESGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIVKPGIGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTADQEIEPLTDRGMVELLKNVDLEYLLDRYPPEMEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVDYKREEGSSTEMGIDTMKASETKRQSDAKAVQLAFSMSKKDAFSNPKAQSYFAEVISSSPSTNHTISPSAVPPLRGNTRVLPLRVAAMCKVLVPTVLDKQGAQLLAVAFLVVSRTWVSDRIASLNGTTVKFVLEQDKASFIRLIGLSVLQSAASSFIAPSIRHLTARLALGWRIRLTQHLLKNYLRNNAFYKVFHMANKNIDADQRITHDLEKRLVWIGHRNGQRGVAILYAYMLLGLGFLRTVTPDFGDLISQEQQLEGTFRFMHERLCTHAESIAFFGGGAREKAMVESRFSELLSHSKYLLKKKWLFGILDDFITKQLPHNVTWLLSLLYAMEHEGDRALISTQGRIVGLFSVTLFITLLPPTDMLYYLTGELAHALRFLASVVSQSFLAFGDILELNRKFVELSGGINRIFELEELLDAAQSGDSINGSITSPIWDYHGKDAISFSKVDIVTPSQKMLARELTCDIELGKSLLVTGPNGSGKSSIFRVLRGLWPIVSGRLSRPSEDVDQEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEFRALKMHGKGQKHSDPRKVLDTHLQVILENVRLNYLLERDNNGWDAKLNWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYGLANKMGITFVTSSQRPALIPFHSMELRLIDGEGNWELRMIKQ 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1964 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1466 IPR027417 -
Aed7g1964 1477 SUPERFAMILY ABC transporter transmembrane region 315 552 IPR036640 GO:0005524|GO:0016021
Aed7g1964 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1475 IPR003439 GO:0005524
Aed7g1964 1477 SMART AAA_5 1264 1465 IPR003593 -
Aed7g1964 1477 SMART AAA_5 607 786 IPR003593 -
Aed7g1964 1477 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Aed7g1964 1477 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 147 IPR036392 GO:0005515
Aed7g1964 1477 Pfam ABC transporter 599 744 IPR003439 GO:0005524
Aed7g1964 1477 CDD PLAT_plant_stress 29 157 - -
Aed7g1964 1477 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 321 732 - -
Aed7g1964 1477 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 1165 1477 - -
Aed7g1964 1477 Pfam ABC transporter 1257 1423 IPR003439 GO:0005524
Aed7g1964 1477 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524
Aed7g1964 1477 Gene3D - 569 841 IPR027417 -
Aed7g1964 1477 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Aed7g1964 1477 ProSitePatterns ABC transporters family signature. 1395 1409 IPR017871 GO:0005524
Aed7g1964 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 811 IPR003439 GO:0005524
Aed7g1964 1477 Gene3D - 1233 1468 IPR027417 -
Aed7g1964 1477 CDD ABCD_peroxisomal_ALDP 582 790 - -
Aed7g1964 1477 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 727 1141 - -
Aed7g1964 1477 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 1165 1477 - -
Aed7g1964 1477 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 727 1141 - -
Aed7g1964 1477 Gene3D ABC transporter type 1, transmembrane domain 204 559 IPR036640 GO:0005524|GO:0016021
Aed7g1964 1477 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 321 732 - -
Aed7g1964 1477 Pfam ABC transporter transmembrane region 2 881 1005 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1964 1477 Pfam ABC transporter transmembrane region 2 1014 1125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1964 1477 Pfam ABC transporter transmembrane region 2 324 494 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1964 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 579 786 IPR027417 -
Aed7g1964 1477 CDD ABCD_peroxisomal_ALDP 1239 1470 - -
Aed7g1964 1477 Gene3D PLAT/LH2 domain 21 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1964 Aed-Chr7 22561991 22601619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1964 208 1477 Acyl Lipid Metabolism Gene Families AT4G39850 70.781 0.0 1894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1964 K25819 - gmx:100813765 2248.78