Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1961 ATGGTAAAAAGACAATCTTTGCGCAACAAAGCCACCCACCTTGTATCTGTCCTTCTCAACCCCATCTCCGATTCCGACACTCCCAATCCCAATCCCAAAACCTCCAAACCCACGCCAACACCTACACCTCCTTCCGTAACCTCTCAGGGAGAAGTAGGTGGATCCGAGACAAATGATGAAGAGGGTAACCGTGGTTTATTTGATAAGGACGGGCCTGATACTTCATCCTTCACCGCGTTCCTCTATTCCTTATTGTCTTCTTCCTCTGACACTGTAGATAATAACGCAAACTCACGCGTGCAGAGTGATGATAACAAAGTTGCAGCAGCACCTGATAACAACAACAACAACCCTTTACCAGACACGTCATCATCTCTGAAGGAAAATGGTGGTGGGAGGAAGAGTTTGTTTTCTAGAAGCAAGCAATCTCTTGGCAGAGCCGTTCGCAGAATGGGTGGATTTCGCCACCAAGATCGTAGGGACAACAATGTTGAAATGAAGTTGGATGATGTAAATGGTTCTAAGGTCTCTGGTGGTGTTGAGATGAGGCTTATTGGGCCTGTGGAAGAGTCTGTGACGGTGCCTTTGGTTGATCTCCCAGAAATTTCTGAGCCTTCGGTTCTCCTTTCAGATAGTATAAGGAATTTTCTCTATGTTTCTCTTCCGCCGCTTATTCATGGAAGGAATTGGCTCTTGTTATACAGCACTTGGAGGCATGGTGTATCACTTTCCACTCTCTACCGGAGAAGCGTAGTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGGGATAAGAAAGGAGCAGTATTTGGCAGCTTAGTTGAAGCACCTCTCAGATCATCCAGCAAGAAAAAATACCAGGGAACAAACAATACATTTGTTTTCACAAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGAGTAAACCGCTTTTTCACACTTTGCAACACTGACTACTTGGCAATCGGCGGAGGAGGTCATTTTGCGCTTTATTTGGATAGTGATCTATTGAATGGTTCAAGTTCAGTCTCGGAAACATATGGGAATCCTTGCCTTGCAAGTTCTACAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTTTATGCTTCAAAATATGAGGAAGTACTTGCAATGAGCAGAACAGAAGCACCTGGGATCTGCCGATGGTAA 1179 0.4478 MVKRQSLRNKATHLVSVLLNPISDSDTPNPNPKTSKPTPTPTPPSVTSQGEVGGSETNDEEGNRGLFDKDGPDTSSFTAFLYSLLSSSSDTVDNNANSRVQSDDNKVAAAPDNNNNNPLPDTSSSLKENGGGRKSLFSRSKQSLGRAVRRMGGFRHQDRRDNNVEMKLDDVNGSKVSGGVEMRLIGPVEESVTVPLVDLPEISEPSVLLSDSIRNFLYVSLPPLIHGRNWLLLYSTWRHGVSLSTLYRRSVVWPGLSLLVVGDKKGAVFGSLVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGVNRFFTLCNTDYLAIGGGGHFALYLDSDLLNGSSSVSETYGNPCLASSTDFEVKEVELWGFVYASKYEEVLAMSRTEAPGICRW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1961 392 MobiDBLite consensus disorder prediction 1 72 - -
Aed7g1961 392 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 386 - -
Aed7g1961 392 MobiDBLite consensus disorder prediction 88 148 - -
Aed7g1961 392 MobiDBLite consensus disorder prediction 88 142 - -
Aed7g1961 392 Pfam TLD 232 369 IPR006571 -
Aed7g1961 392 ProSiteProfiles TLDc domain profile. 207 370 IPR006571 -
Aed7g1961 392 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 386 - -
Aed7g1961 392 SMART 109ultra 206 370 IPR006571 -
Aed7g1961 392 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1961 Aed-Chr7 22550344 22553831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1961 230 377 EF-hand Containing Proteins AT5G06260 30.380 6.13e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1961 - - gmx:100804124 595.504