Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1960 ATGCTTTTGGGCCCGGAAGGGTTGTTTGGCCTCGGTGCGGTCGTGGAGCCAGTGGTGAGTGTTGGCGTGGGGATCCTCCTGGACGAGGCTGGACTTGGTTTGCTTGTTGATCCTCTTCTTGTCCTCCTCGATGATTCGGATCGGGTACAGATCCGGAGAAATGGAGAGAGGGGTTTTGAGTGTGACGTAGGCTTTTTTGTAGTCGGGTTTGGCGATAAGCAACCCGCCCCGTTTCTTCTTCTTGCCCTCCATGTTCAGCGTTTGGACCTTCTCCACCTCGAACCCGTAGAGGGATTCCAGGACGCGCTTTATCTCGATCTTCGTCGCAGAAGGGATCGTCTTCAGTGCGATTTCTTGGATGTTCGTGAAGCTGTTCGGCATCAAAAGCTTTATTGGAAGGTTCGCGAACTGCACCACCCTTCTTCCCAATCTGCTTCCCATCGTCGTCACTCGAACAAGCTCCAACTCCGCTCAAGCTGGAATACCAAGCTACATAACCTGCTACCCGAGTTTCCTTTCCAGCCCAAAGCCCAAATTAACTTGTCTTATGCCGCCATGTGCGGAATCCTCGCAGTGTTGGGTTGCGTCGACCACTCTCAGGCCAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGGCATAGAGGCCCTGACTGGAGTGGCTTACATTGCCATGAGGATTGTTACCTTGCTCATCAACGCCTTGCTATTGTTGACCCTACATCAGGGGATCAACCTTTGTACAACGAAGATAAAACTGTTATTGTCACTGTAAATGGGGAGATATACAATCACAAGGAATTGAGACAGAAGCTGAGTTCCCATCAATTTCGAACTGGCAGCGATTGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAAGAGTTTGTTAATATGCTTGATGGGATGTTTGCCTTTATTCTTCTTGATACTCGGGATAAAAGTTTCATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTATACTTGGGCTGGGGTCATGATGGTATGTGGCTTTACCTTCTGGTTGTTATAACATTTTACATTTTCGCTTCAATCTTAATGGTGTCTCAGCCTCTCAAATTAAGTAAATCCAAGAGGCATGAGTTATCACATGAATGGATCAGATATGATATATGTGGAAGGGCTGGTTTATCTGCAGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTAAGTGATGATTGTGAGAGGTTCATATCTTTTCCCCCAGGGCATATATATTCCAGCAAACAGGGAGGGTTAAGAAGGTGGTACAATCCACCATGGTTTTCAGAGGATATTCCATCAACTCCCTATGATCCAATCCTTTTGCGCAAGACCTTCGAGAAGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCCGGAGGATTGGACTCATCACTTGTAGCTGCTGTGGTCAATCGCTATCTGGCTCAATCTGAAGCGGCTCGTCAATGGGGATCTCAGTTACATACTTTCTGCATTGGTTTAAAGGGCTCTCCGGACTTGAAAGCTGCAAGAGAGGTGGCAGATTATCTTGGTACTCGTCACCACGAACTTTATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACAACTATCAGAGCAAGCACTCCAATGTTTCTCATGTCCAGAAAAATTAAAGCCTTGGGAGTGAAAATGGTTCTGTCTGGAGAAGGTTCGGATGAAATATTTGGAGGTTACCTATATTTTCATAAGGCACCTAACAAGAAAGAGTTGCATGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAAGTTCAGCATGGGGTGTAGAGGCACGTGTACCGTTCTTGGATAAAGAGTTTATCAACGTAGCCATGAGTATAGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGCGATGGGGTTGGTTACAGCTGGATTGATGCACTGAAGGATCATGCTAACAAACAAAATGCAGCAAGGGCAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCCAAAAATCTTGATCCTTCTGGTCGTGCTGCGCTTGGTGTTCATGCAGCTGCATATGACGATAAAATTGAGGACACCAAAAATGGACCCCTTTAA 2304 0.4549 MLLGPEGLFGLGAVVEPVVSVGVGILLDEAGLGLLVDPLLVLLDDSDRVQIRRNGERGFECDVGFFVVGFGDKQPAPFLLLALHVQRLDLLHLEPVEGFQDALYLDLRRRRDRLQCDFLDVREAVRHQKLYWKVRELHHPSSQSASHRRHSNKLQLRSSWNTKLHNLLPEFPFQPKAQINLSYAAMCGILAVLGCVDHSQAKRARIIELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEHGEEFVNMLDGMFAFILLDTRDKSFIAARDAIGITPLYLGWGHDGMWLYLLVVITFYIFASILMVSQPLKLSKSKRHELSHEWIRYDICGRAGLSAGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFSEDIPSTPYDPILLRKTFEKAVVKRMMTDVPFGVLLSGGLDSSLVAAVVNRYLAQSEAARQWGSQLHTFCIGLKGSPDLKAAREVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKELHEETCRKIKALHLYDCLRANKSSSAWGVEARVPFLDKEFINVAMSIDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDALKDHANKQNAARATVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHAAAYDDKIEDTKNGPL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 710 760 - -
Aed7g1960 767 CDD AsnB 187 429 IPR033738 -
Aed7g1960 767 Gene3D HUPs 432 717 IPR014729 -
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE 186 341 - -
Aed7g1960 767 Pfam Asparagine synthase 447 598 IPR001962 GO:0004066|GO:0006529
Aed7g1960 767 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 447 710 - -
Aed7g1960 767 CDD Asn_Synthase_B_C 448 693 IPR001962 GO:0004066|GO:0006529
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE 710 760 - -
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 186 341 - -
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE 389 709 - -
Aed7g1960 767 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 187 422 IPR017932 -
Aed7g1960 767 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 185 340 IPR029055 -
Aed7g1960 767 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 187 371 IPR029055 -
Aed7g1960 767 Pfam Glutamine amidotransferase domain 233 340 IPR017932 -
Aed7g1960 767 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 389 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1960 Aed-Chr7 22544255 22549914 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1960 K01953 - gmx:100788806 1002.66