Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1952 ATGGCTATTGCACCTTTTGGTAGTACATCAGCTACTCAATGGGGAATTCGTCCTCAGATTTTCGCAGGTTTGACCGGGATGGGGATGGGGAAGATTGCATCATCCAGGAACAATGTTACAAGCAGGATAAGGTTTATGGCTGCCCCATGTTCAAGCTTTTTTTCTCGTGATTCCTTGCTTGCACTGTTTGACAGAGGTTCATCGCAAACTTCGCATCGTCATAGGGGATCGAGATTAATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTCGGGGTGTCAAGAAATTCCAGTAAATCTGAAATTAAGAGTGCAACATCTGCTACCTTGTCTGCTTCCTTGGCACCGTATCCCTTGGTGGCACCGTCACCACCATCTGTGCCACTTTCACTGCTGTGTACATGTGCGCAAATCAAATTTCTCTCTACTTTGGACATTTCAGCTTATCGGAGGCTTGCCCGGAGTTGTCATCCTGATGTGAACAAAGAACCTGATGCAGAAAAGAAATTTAAAGAACTTAGTAATGCGTATGAGGTCTTGTCAGATGATGAGAAACGATCCATATATGACACATATGGAGAGGCTGGACTTAAGGGTTCAGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGACCTGTTTGAGACACTGTTTGAGGGCATGGGTGGCATGGGGGGCAGCAGAGGATCTTGGAATGGAGCAGTTGAGGGTGAAGATGAGTATTACAGTAATGCTGGAAGGCGTGGGGGTTCTCCTGGTGACCTCTTTGTTGTTCTTGAAGTTATCCCTGACCCCGTGCTTAAGCGAGATGACACAAACATTTTGTACACATGTAAGGTGTCTTATATTGATGCAATCTTGGGGACTACAATTAAGATTCCTACTGTAGATGGCATGGTGGATTTGAAAATCCCATCTGGGACTCAACCAAGCTCAACACTTGTTATGGCTAAGAAAGGTGTTCCCGTGCTTAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGGGTGCAAGTTGAAATCCCCAAAAAATTGAGCAAAGAAGAGAGAAAACTTGTTGAGGAACTAGCTGATTTAAGCAAAGGCAAGACTGCTGCCACCAGTAGGAGATAA 1113 0.4465 MAIAPFGSTSATQWGIRPQIFAGLTGMGMGKIASSRNNVTSRIRFMAAPCSSFFSRDSLLALFDRGSSQTSHRHRGSRLIVRADADYYSVLGVSRNSSKSEIKSATSATLSASLAPYPLVAPSPPSVPLSLLCTCAQIKFLSTLDISAYRRLARSCHPDVNKEPDAEKKFKELSNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGGMGGSRGSWNGAVEGEDEYYSNAGRRGGSPGDLFVVLEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKIPTVDGMVDLKIPSGTQPSSTLVMAKKGVPVLNKKNMRGDQLVRVQVEIPKKLSKEERKLVEELADLSKGKTAATSRR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1952 370 Gene3D DnaJ domain 72 203 IPR036869 -
Aed7g1952 370 SMART dnaj_3 138 185 IPR001623 -
Aed7g1952 370 Pfam DnaJ domain 147 190 IPR001623 -
Aed7g1952 370 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 147 243 - -
Aed7g1952 370 SUPERFAMILY Chaperone J-domain 147 228 IPR036869 -
Aed7g1952 370 CDD DnaJ 86 182 IPR001623 -
Aed7g1952 370 SUPERFAMILY Chaperone J-domain 32 105 IPR036869 -
Aed7g1952 370 ProSitePatterns Nt-dnaJ domain signature. 170 189 IPR018253 -
Aed7g1952 370 ProSiteProfiles dnaJ domain profile. 86 193 IPR001623 -
Aed7g1952 370 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 244 369 - -
Aed7g1952 370 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 106 - -
Aed7g1952 370 Gene3D - 262 370 - -
Aed7g1952 370 Pfam DnaJ C terminal domain 236 342 IPR002939 -
Aed7g1952 370 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 353 IPR008971 GO:0006457|GO:0051082
Aed7g1952 370 PRINTS DnaJ domain signature 88 106 IPR001623 -
Aed7g1952 370 PRINTS DnaJ domain signature 165 185 IPR001623 -
Aed7g1952 370 PRINTS DnaJ domain signature 185 204 IPR001623 -
Aed7g1952 370 PRINTS DnaJ domain signature 149 164 IPR001623 -
Aed7g1952 370 PANTHER BNAA01G34580D PROTEIN 147 243 - -
Aed7g1952 370 PANTHER BNAA01G34580D PROTEIN 244 369 - -
Aed7g1952 370 PANTHER BNAA01G34580D PROTEIN 33 106 - -
Aed7g1952 370 CDD DnaJ_C 235 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1952 Aed-Chr7 22483586 22487414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1952 K03686 - lja:Lj0g3v0344319.2 250.366