Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1944 ATGGTTTATTCGATGTCTTCTGCAATATTGGCTGCACGTAAGTCTGCACCAACAACTGGAGGCGTGAAGAAGCCACATCGTTATCGTCCTGGAACCGTTGCTCTTCGTGAGATTAGGAAATACCAGAAGAGTACTGAGCTCTTGATCAGGAAGCTTCCTTTCCAGAGGTTGGTTCGTGAAATCGCCCAGGATTTCAAGCCACTTTGGAATTGTATTGGACAACCTTTAGTTGCCACCTAA 240 0.4583 MVYSMSSAILAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKPLWNCIGQPLVAT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1944 79 Pfam Core histone H2A/H2B/H3/H4 17 65 IPR007125 GO:0003677
Aed7g1944 79 Gene3D Histone, subunit A 4 76 IPR009072 GO:0046982
Aed7g1944 79 PANTHER HISTONE H3 8 66 - -
Aed7g1944 79 ProSitePatterns Histone H3 signature 2. 53 61 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed7g1944 79 SUPERFAMILY Histone-fold 11 67 IPR009072 GO:0046982
Aed7g1944 79 PANTHER HISTONE H3 8 66 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed7g1944 79 PRINTS Histone H3 signature 20 41 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed7g1944 79 PRINTS Histone H3 signature 44 61 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed7g1944 79 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed7g1944 79 SMART h35 20 76 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1944 Aed-Chr7 22424261 22425552 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1944 K11253 - bvg:104887815 114.39