Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1913 ATGGGTTGGTCGTTTCCATCAATGAGAATAATAATAATGTTCCTATTGGCGGGTGCAACAACATCATCATCAGCTTTTCCACTATACAGTCAAAAACGGTGGATAGTTGATACAAATGGAACGAGAGTGAAACTAGCATGTGTGAATTGGGTGTCCCATTTGGAATACATAGTGCCAGAGGGCTTAGGCCAGAGACCTTTGGATGTGATTGTCGATGAAATCAAATCAATGGGCTTCAACTGTGTTAGACTCACTTGGCCTATTTATTTGCTCACTGATGACTCTTTTCCTACTCTTACTGTAAGACAATCTTTCAAAAAACTTGGCCTCTCTCAAGCCATTTCAGGTGTCCTAGCCAACAACCCTGCTCTCATTGATCTTCCCCTCATCAAAGCCTACCAGGATGTGGTGAAAGTCCTCGGAGACAAGGGTGTAATGGTGATTTTGGACAACCACGTCTCGAAGCCGCAGTGGTGCTGCAGTAATGACGACGGCAATGGCTTCTTCGGGGACCAGTATTTCGACCCTGACCTCTGGATCAAGGGCCTCACCAAAATGGCCACCCTTTTCAAAGGAGTCACTAATGTCGTCGCCATGAGCTTGAGAAATGAGCTTCGAGGTCCTAGACAAAATCACAATGATTGGTTCAAGTACATGCCAAAAGGAGCAGAAGCAGTGCATGGCGCAAATCCAGATGTTCTAGTCATAATGTCTGGGCTAAATTACGACACAGACCTATCACTCCTTAGAAATCACCTGCCACTGAAACTAAGCTTCGATAGAAAACTAGTATTCGAGTTGCACTGGTACAGCTTCAGCGACGGTGACGCGTGGATAACAGGGAATCCAAACCAAGTGTGTGCGAAAGTGACAGAGAGAGTGATGAGAAGTGCAGGGTACTTGTTGGAACAAGACTATCCATTGATTCTGACCCAGCTTGACTTCGATTGGGTCCTGTGGACTCTCGCTGGGAGTTATTACCTTCGAGAAGGCACTATTGGATTAATCGAGGTTTATGGTATTCTCAATGAGAACACAACCACGGTTACCGACCCAATTTTCTTGCAAAGAATCTCTGCTATTCAACTTCCTTATCAAGGGCCGGGGTTATCAGAAGTGGAAGTGCACAAAGTGATTTTTCACCCGTTGACAGGTCTTTGCATCATGGGAGAGTTAGAGCAGCCACTGAAATTGGGACCGTGTTCTAAATCTGAGGGATGGGCATACACAGCGCAGAAGGTACTATCGGTGAAGGGTATAAAAAGTACATGTTTACAAGCAGAGGGAGAAGGGAAGGAAGCTAAACTTGGAAATAAATGCTCTGGTCCGAATTCAAATTGGGAAATAATCTCTGACTCGAAGTTGCACCTCTCGAGTAAAATCAACAAGGATTCTGATGTGTGTCTGGATGTGGACGGCAACAACAACGTTGTCACCAATCCATGCAAATGCCTGAGTGGTGATAAGACCTGTGATCCTGCAACCCAATGGTTCAAACTCGTTGACACCACCAGGAAGTCAACCTGA 1527 0.4538 MGWSFPSMRIIIMFLLAGATTSSSAFPLYSQKRWIVDTNGTRVKLACVNWVSHLEYIVPEGLGQRPLDVIVDEIKSMGFNCVRLTWPIYLLTDDSFPTLTVRQSFKKLGLSQAISGVLANNPALIDLPLIKAYQDVVKVLGDKGVMVILDNHVSKPQWCCSNDDGNGFFGDQYFDPDLWIKGLTKMATLFKGVTNVVAMSLRNELRGPRQNHNDWFKYMPKGAEAVHGANPDVLVIMSGLNYDTDLSLLRNHLPLKLSFDRKLVFELHWYSFSDGDAWITGNPNQVCAKVTERVMRSAGYLLEQDYPLILTQLDFDWVLWTLAGSYYLREGTIGLIEVYGILNENTTTVTDPIFLQRISAIQLPYQGPGLSEVEVHKVIFHPLTGLCIMGELEQPLKLGPCSKSEGWAYTAQKVLSVKGIKSTCLQAEGEGKEAKLGNKCSGPNSNWEIISDSKLHLSSKINKDSDVCLDVDGNNNVVTNPCKCLSGDKTCDPATQWFKLVDTTRKST 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1913 508 CDD RICIN 377 482 IPR000772 -
Aed7g1913 508 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 311 507 - -
Aed7g1913 508 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 8 311 - -
Aed7g1913 508 Gene3D Glycosidases 27 354 - -
Aed7g1913 508 ProSiteProfiles Lectin domain of ricin B chain profile. 411 497 - -
Aed7g1913 508 SUPERFAMILY Ricin B-like lectins 376 500 IPR035992 -
Aed7g1913 508 Gene3D - 381 498 - -
Aed7g1913 508 Pfam Cellulase (glycosyl hydrolase family 5) 66 311 IPR001547 GO:0004553|GO:0071704
Aed7g1913 508 PANTHER CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN 311 507 - -
Aed7g1913 508 PANTHER CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN 8 311 - -
Aed7g1913 508 SUPERFAMILY (Trans)glycosidases 25 356 IPR017853 -
Aed7g1913 508 Pfam Ricin-type beta-trefoil lectin domain 385 482 IPR000772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1913 Aed-Chr7 22188079 22190100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1913 16 505 Glycoside Hydrolase AT1G13130 52.216 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1913 - - gmx:100805196 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1913 7 22188079 22190100 Aed7g1913 7 22188079 22190100 ECH