Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1907 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCGGCCCAACCCCGTGGTGGCCAAATCGCCCAGCCAGTGTCAGCTAGGGCTCGATGCGTCCATCAGGACCGTCAACTGCGCTTCCAAATCGACCTTCTCCGCGCATGATTCCTCCGTCGGCGCTGATTCCGTCAAGGCCTCCGCCGCCGCCGCGGATCTCGAGGAGGAGGAGGAGCCGCGCGATTCCAAGGCCTTCGGCGGTGGAGTAGCCGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGGTCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTTTCGTACTACAAGATTCACGGACCGGACAAGATCTTGACGAGTCCGGCCAGGGATAGGAGCGTCAGGGTGATCGGAGAAGAGTCATCCAAGTACGTGAAAAAGGCCAATTGGAATCTGAATCTGAATCGAGCATCTTCTGGAGGAGCAGGAGGTAACAGTAACAGTAACAGTAACAACGGGAAGCAATGTAAACCGTTCGGTGAGATACACTTGAAGGTTTCTTCTGTTCGTTCCAGCAAGTCTGATGATAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTTCACTTGAGGAGTGTGTCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCTAGAGCTCTTACAAGTAGCGATCTTGCAACTTCAGAAGATATCGTAGTTTCGACGGAGAAGCTACGATCACGACTGTCACAAGAAGGCATAAGTGAAACAATCATTAATGACTGTGAGTCTATTATGCTTTCCGAAGTCTCTTATCTTCAAAGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGCTGGACACCTTAAAACAACTGGAGGTATCAATCTTCCCTTTTGCTATATATGCTACAGAAAAAATAGAGCTGGAAACTACTGTAGTGGATGAAACAAAGGAACGTGAATCATACTGTGGACAAGGAAATAGAAGGTTTAGTGATTTCTATTCCGTCATGTCGGAGGGCAGTGCTACTGATTCAGTGGCAGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGAAGATAGAACATATTTTGACACAAATGAATTTTTGTATTCCGATGCCCTAAGAAGTGCTTCCTATCGAAGTAGGGAAGGTATGGGCAGTGCCAGTATATTTGATAGAGATTATATTTGTTATGATGGTGCGCATGGGTTTGAGAAGGAGATCAAGGATGTAACTTATCCATATGTCAAAAGAAGGGATAACCTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGTTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAGTGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCTATGCATCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTCGGGGAGACCTATGAAGCTGACTATCCAGATAAAGGACTTAGGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGGGGATGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCTATCCAGTTAGATCCTGTGGGTGTCCTCACTCTACAGTTTGAGGGTGGTGAGACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAAGGGCAGCGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCTATTATAGACAGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTACGTACTTGGGGATCCAACAACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCATTGTTGTGGGAAAGGGACAACCATGTACCGAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTCATTAGAGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGCTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAACCGAGATGGTTTAAGAAGGATGATGAGGATGGCTGTTACCGATATAATGGTGGCTATTGGGAAGCGAGAGAAAAGAATAAAAATTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCGGAAGAGACTGTATCCTACTGA 2502 0.4436 MNPLCCIAPVSIDRDRPNPVVAKSPSQCQLGLDASIRTVNCASKSTFSAHDSSVGADSVKASAAAADLEEEEEPRDSKAFGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILTSPARDRSVRVIGEESSKYVKKANWNLNLNRASSGGAGGNSNSNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRSVSREDRAMWIEALQSAKDLFPRALTSSDLATSEDIVVSTEKLRSRLSQEGISETIINDCESIMLSEVSYLQSKLKFLQQKHVMLLDTLKQLEVSIFPFAIYATEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDEDRTYFDTNEFLYSDALRSASYRSREGMGSASIFDRDYICYDGAHGFEKEIKDVTYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGSDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEGGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNHVPKTRYNLSPFAISLNEILPGSLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDDEDGCYRYNGGYWEAREKNKNWDGIPDIFGQSCDLPSCSEETVSY 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1907 833 SUPERFAMILY PH domain-like 88 231 - -
Aed7g1907 833 Pfam Pleckstrin homology domain 90 228 - -
Aed7g1907 833 Gene3D - 747 814 - -
Aed7g1907 833 Gene3D - 85 233 IPR011993 -
Aed7g1907 833 Pfam Oxysterol-binding protein 451 805 IPR000648 GO:0008289
Aed7g1907 833 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 822 - -
Aed7g1907 833 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 822 IPR000648 GO:0008289
Aed7g1907 833 Coils Coil 758 778 - -
Aed7g1907 833 SMART PH_update 86 233 IPR001849 -
Aed7g1907 833 Gene3D - 536 703 - -
Aed7g1907 833 ProSiteProfiles PH domain profile. 85 231 IPR001849 -
Aed7g1907 833 SUPERFAMILY Oxysterol-binding protein-like 445 819 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1907 Aed-Chr7 22150512 22156801 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1907 K20456 - gmx:100817856 1527.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1907 7 22150512 22156801 Aed7g1907 7 22150512 22156801 ECH