Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1903 ATGGATGCCACAACCAGCGGAACCCCAACTATCCAATACCATAACATCCCTGACCAGCCAATTACTGCCATTATTGCCTCTCCACTTCCAACATTTCAAAGGCAGCAACGCCATTGCTTTGGGGACTCAACTCCAGGAGAGTTTCCCTTATCTGCTAATCCCTCCATTGTCCTTCATGTCCTCACTGCATGCAACTTGGACCCTCAAGACCTTGCTAAACTAGAGGCAAGTGCTACTACTATCATCACTATGCTTTTCTTATGTGAACTTGCAACATGCTCCTTCTTCAGGCAGGCAGCAAACTTTGCTCCGGATTTGAACTTGTCCTTATCGGAGCTCGCCGCACTCGACATGTGCCAGAAGAGAGCCATCTTCAAGCCAATGACAACAGAACAACGCCAAGATTTGAAGCTAAGGTGTGGAGGTTCATGGAAACTGGTGCTGAGGTATTTGATGGCTGGAGAAGCATGTTGCAGGAGGGAGAAGTCACAAGCTATAGCAGGTCCTGGTCACAGCATTGCTGTGACATCAAAAGGGGTTGTTTATTCATTTGGTTCCAACAGTTCAGGACAACTTGGACAAGGCACCACTGAGGAGGAATGGCGACCTCGACCAATAAGAACTTTGCAAGGCATTCGAATCATACAAGCTGCTGCTGGGGCTGGGAGGACAATGTTGGTCAGTGATTCTGGCCAGGTTTATGCATTTGGGAAAGACTCATTTGGGGAAGCTGAGTATGGAGTTCAAGGTTCAAAAACGGTTACAGCTCCACAGATAGTGGAGTCTTTGAAAAACATATTTGTTGTCCAAGCTGCAATTGGTAATTTTTTCACAGCTGTGTTGTCAAGAGAGGGCAGGGTTTATACATTTTCTTGGGGTAGTGATGGCAAACTCGGTCATCACACTGATCAAAGTGATGTGGAACCCCATCCCTTATTAGGTGCTCTTGAAAACATACCAGTAGTGCAAATTGCTGCTGGATATTGCTACCTGCTTTGTCTGGCTTGTCAACCCAGCGGAATGTCAGTGTATTCTGTTGGGTGTGGCTTGGGGGGCAAGCTTGGACATGGCTCGAGAACTGATGAAAAGTACCCTCGCTTGATCGAACAGTTCGAGCTACTGAACCTCCAACCCATGGTTGTTGCAGCCGGTGCTTGGCATGCCGCTGTGGTGGGGCGGGATGGCCGTGTTTGCACATGGGGATGGGGCCGATATGGTTGCTTGGGGCACGGGAATGAAGAATGTGAATCAGTACCTAAGGTGGTGGAAGCACTGAGTAATGTCAAAGCTGTTCATGTTGCAACTGGAGATTACACAACCTTCATAGTGTCTGATGATGGTGATGTGTATTCATTTGGCTGTGGAGAATCTGCTAGTCTTGGGCATAATGCTGCTGGAAATGATGGGCAGGGGAACAGACATGCAAATGTGTTAAGTCCAGAGCTTGTGACATCACTAAAAGAGATAAATGAACGGGTGGTACAGATTAGTCTGACGAATTCAATATACTGGAATGCTCATACCTTTGCCCTCAGTGAATCAGGGAAGCTGTATGCATTTGGGGCTGGAGACAAAGGACAGCTAGGAATTGAACTTGTTGCTAACCAGACTGAAAGGGGAAATCCAGAAAGGGTTGAAATTGATCTACTTGGTTAA 1656 0.471 MDATTSGTPTIQYHNIPDQPITAIIASPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHVLTACNLDPQDLAKLEASATTIITMLFLCELATCSFFRQAANFAPDLNLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGQGTTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVTAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFELLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFIVSDDGDVYSFGCGESASLGHNAAGNDGQGNRHANVLSPELVTSLKEINERVVQISLTNSIYWNAHTFALSESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDLLG 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 447 514 IPR000408 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 515 551 IPR000408 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 341 394 IPR000408 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 179 230 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 179 226 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 394 442 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 446 497 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 343 391 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 284 329 IPR000408 -
Aed7g1903 551 Pfam Regulator of chromosome condensation (RCC1) repeat 230 281 IPR000408 -
Aed7g1903 551 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 549 - -
Aed7g1903 551 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 1 549 - -
Aed7g1903 551 SUPERFAMILY RCC1/BLIP-II 163 463 IPR009091 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 231 284 IPR000408 -
Aed7g1903 551 Gene3D - 160 336 IPR009091 -
Aed7g1903 551 Gene3D - 337 549 IPR009091 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 181 197 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 162 175 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 287 301 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 384 402 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 271 287 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 231 247 IPR000408 -
Aed7g1903 551 PRINTS Chromosome condensation regulator RCC1 signature 442 463 IPR000408 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 285 337 IPR000408 -
Aed7g1903 551 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 395 446 IPR000408 -
Aed7g1903 551 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 381 391 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1903 Aed-Chr7 22118481 22121235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1903 - - gmx:100779690 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1903 7 22118481 22121235 Aed7g1903 7 22118481 22121235 ECH