Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1880 ATGGCAGCATCAGACAAGAAGATTAGGATCGGTATCAACGGATTTGGAAGAATTGGCCGTTTGGTGGCCAGGGTTGCTCTTCAAAGGAACGATGTTGAACTCGTTGCTATCAACGATCCTTTCATCACAACTGATTACATGACATACATGTTCAAGTATGACACCGTTCATGGCCAGTGGAAACATTTTGATGTCAAGGTGAAGGACTCTAATACCCTTCTCTTCGGTGAGAAGCCCGTCACCGTTTTTGGAATCAGGAACCCTGAGGAGATTCCATGGGGTGAAGCTGGTGCTGATTATGTTGTCGAGTCAACTGGTGTGTTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGTTATCAATGACCGATTTGGAATTGTGGAGGGTCTTATGACCGCTGTTCATGCCATCACAGCTACTCAGAAGACTGTTGATGGTCCTTCAAGCAAGGACTGGAGGGGTGGAAGAGCTGCTTCCTTCAACATAATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTAGGAAAAGTTCTTCCAGCATTGAATGGTAAATTGACTGGTATGTCCTTCCGAGTCCCCACTGTGGATGTTTCAGTTGTTGATCTCACTGTCAGGCTAGAGAAGCCAGCAACCTATGCACAGATCAAAGCTGCTATCAAGGAGGAAGCAGAGGGCAACTTGAAGGGTATTTTGGGTTACACCGAAGACGATGTGGTGTCTACTGATTTTATTGGTGACAACAGGTCTAGCATATTTGACGCTAAGGCCGGAATTTCTTTGAATGACAACTTTGTAAAACTTGTTTCGTGGTATGACAACGAATGGGGTTACAGTACCCGTGTGATTGATTTGATTGTGTACATTGCAACCGTGGCTTAA 879 0.4585 MAASDKKIRIGINGFGRIGRLVARVALQRNDVELVAINDPFITTDYMTYMFKYDTVHGQWKHFDVKVKDSNTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKVINDRFGIVEGLMTAVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKPATYAQIKAAIKEEAEGNLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVIDLIVYIATVA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1880 292 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 117 271 IPR020829 GO:0016620
Aed7g1880 292 PIRSF GAPDH 115 292 IPR020831 GO:0016620
Aed7g1880 292 PIRSF GAPDH 6 120 IPR020831 GO:0016620
Aed7g1880 292 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 8 111 IPR020828 GO:0051287
Aed7g1880 292 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 119 289 IPR020831 GO:0016620
Aed7g1880 292 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 4 119 IPR020831 GO:0016620
Aed7g1880 292 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 227 242 IPR020831 GO:0016620
Aed7g1880 292 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 187 204 IPR020831 GO:0016620
Aed7g1880 292 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 130 146 IPR020831 GO:0016620
Aed7g1880 292 Gene3D Dihydrodipicolinate Reductase; domain 2 122 273 - -
Aed7g1880 292 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 115 271 - -
Aed7g1880 292 Gene3D - 274 287 - -
Aed7g1880 292 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 120 IPR036291 -
Aed7g1880 292 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 119 289 - -
Aed7g1880 292 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 4 119 - -
Aed7g1880 292 Gene3D - 5 121 - -
Aed7g1880 292 SMART gp_dh_n_7 8 122 IPR020828 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1880 Aed-Chr7 21968581 21971321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1880 K00134 - gmx:100782924 518.079