Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1870 ATGCCTGGGAAGATTTCTCACCTCAAATATGAATTTCTCAGGGAAGGTGTTACTGGAGAAGACTATGCATTAACTACAGTAATTTCTCGAGAGGAATATGCTAACAAGTATGGCCCTACAACTGGTGACAAAATCCGTCTTGGTGATACTAACTTGTTTGCTGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGGAAAGTCATAAGAGATGGAATGGGTCAATCAAGTGGCCATCCACCCAAGGGATCCTTGGATACTGTTATAACCAATGCCGTGATCATTGATTATACTGGAATTATCAAAGCAGATATTGGTATTAAAGATGGACTAATTATCTCAATAGGAAAAGCAGGAAATCCAGACATTATGAATGATGTATTTCATAATATGATAATTGGGGCTAATACTGAAGTTATTGCTGGAGAGGGATTGATTGTGACAGCTGGAGCTATAGATTGTCATGTGCATTTTATATGCCCTCAATTAGTATATGATGCCGTAACAAGTGGTATCACAACATTAGTGGGAGGAGGAACAGGACCAGCTGATGGAACACGTGCTACAACTTGTACACCAGCACCAAATCAGATGAAATTCATGCTGCAATCAACAGACGACATGCCTTTAAACTTTGGTTTCACTGGAAAAGGGAATAGTTCCAAGCCTGATGAGTTGCATGAAATAATCAGGGCAGGAGCTATGGGACTGAAGCTGCATGAGGACTGGGGAACTACACCGGCTGCAATAGACAATTGTTTGACCGTAGCAGAACAATATGATATTCAGGTTAACATACACACAGACACCTTAAACGAATCTGGATTTGTTGAACATACAATTGCTGCATTTAAAGGAAGAACTATTCATACTTACCACAGTGAAGGTGCAGGAGGTGGTCATGCTCCAGATATCATAAAAGTATGTGGTGAGAAGAATGTCTTGCCCTCATCAACAAATCCTACGCGCCCTTATACATATAATACCATAGATGAGCATCTTGACATGTTGATGGTCTGCCATCATCTTAATAAGGATATTCCAGAAGATGTAGCTTTTGCAGAATCAAGAATAAGAGCTGAAACAATTGCTGCTGAAGATATTTTGCATGACATGGGGGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTCGAATTGGAGAGGTGATAAGCAGAACTTGGCAAACTGCCGATAAGATGAAGTCACAAAGAGGACTGCTGCACCCTGGTGAAGACAATGACAACTTTCGGATCAAACGTTATGTTGCAAAGTACACCATAAATCCAGCTATAGCGAATGGTTTGTCGCAATATGTTGGTTCAGTTGAGGTGGGAAAGTTAGCTGATCTTGTATTATGGAAGCCATCATTTTTTGGAGCAAAGCCAGAAATGGTGATCAAAGGTGGTGTGGTTGCATATGCTAACATGGGTGACCCAAATGCAAGCATCCCAACACCTGAACCGGTGATTATGAGGCCTATGTTCGGAGCATTTGGCAAGGCTGGTAGTGCACACTCCATTGCTTTTGCAGCTTTGGACAATGGGGTAAAAGCTTCGTATGGACTTAACAAGAGGGTGGAAGCTGTGGAGAATGCAAGGAAGCTCACCAAACTAGACATGAAACTGAATGACACTCTTCCACAAATCACTGTGGACCCAGAAACATACACAGTTACAGCAGATGGAGAGACTATATTTTATTTTATACATAATTTATGTTCAAGGTTTGTGGGTCCCCATCGCTCACTTGTCAGCCACCAACCACAAGAAAACAACAACGATGAAGGAACACAAACACCCCTTGATGACGTCCTTGCACGTTTAGAAGCACTTCTGACGCTACTTAGCTTCAACCAGTCTTCATTGTTGAGCTTCACTGTGTCTTGGACAACTTTCGCGGTGGTTGGTGTGGCGGCGCCACTCCTGGCCCTTCAGGTATACGACACGGACAAGAATCAGATAAAAGGTTTCGAAGTTGGCATTGTTGCATTTCAGACTTGTCTAGCTGCTGTGTCCTTGATCTGCCTCTCTCACAATCTTCGCAAGTATGGACTCACCAGGTTCCTCTTTGTTGACCGCCACGCTGCTCACATGCCATGCTTTCACTATGATTACGTTAAACAGATTTCGGGATCTTTACGCTTGATCATTCTGTGGGTGTTGTCATGTTTCCTTTTGAAGACAGCCAGAGAAATCACTCGGCTTTCCTTGGTAGAAGAAGAACACGGGTCCCTTTGGCTCTCTATTGCTGTTTTCTTGGCTCTGATCGTGTCATGGACTTATGTGAGTGCAATCTCTTTATCAGCCTGTGTTCTGTTTCACTTGGTCTGCAGTTTGCAACTCATTCACTTTGATGATTACGGGGAACTCTTGCAAAGGGAAAATGAAAATGTGTTGGTTTTTATGGAAGAGCACATTCGGTTGAGGTTCCATCTCTCCAAGATAAGCCATAGGTTCAGAATTTACCTGCTTCTACAGTTCTTGGTTGTCACAGCTAGCCAATTTGTGACTCTATTACAGGTCACTGGATTTGGTGGAGCACGCACTTTCATAAGTGGTGGAGATTTTGCTGTTTCAACACTTGTTCAGGTGGTTGGGATTATTATATGTCTTCATGCAGCAACAAAGATTTCACATAGAGCTCAAGGCATTGTTTCACTTGCAAGCAGGTGGCATGCGCTTGTAACATGCACCTCTGATGCATCTAAACTGAGATATTGTGCTAGTACAGGGAGCTTGGAGGCTGCAAAACATTTAAACTCAATATTTTTGGATTACTCAGAAAGTGATCTAGAGTCATCGGATTACATCGGAGTGCCTTCAAATATTCAGTTAGCTTCGTATATGTCCTCACATCACAAGAGACAAGCCTTTGTGATGTATCTGCAAACGAATGCTGGAGGAATCAGTATATTTGGATGGACAGTTGACCGGTCTCTTGTGAACACAATATTTTTCTTTGAATTGACTCTGGTTACTTTTGTACTTAGTAAGACAATACTTTAA 3030 0.4201 MPGKISHLKYEFLREGVTGEDYALTTVISREEYANKYGPTTGDKIRLGDTNLFAEIEKDFAVYGDECVFGGGKVIRDGMGQSSGHPPKGSLDTVITNAVIIDYTGIIKADIGIKDGLIISIGKAGNPDIMNDVFHNMIIGANTEVIAGEGLIVTAGAIDCHVHFICPQLVYDAVTSGITTLVGGGTGPADGTRATTCTPAPNQMKFMLQSTDDMPLNFGFTGKGNSSKPDELHEIIRAGAMGLKLHEDWGTTPAAIDNCLTVAEQYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGEKNVLPSSTNPTRPYTYNTIDEHLDMLMVCHHLNKDIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKSQRGLLHPGEDNDNFRIKRYVAKYTINPAIANGLSQYVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGVVAYANMGDPNASIPTPEPVIMRPMFGAFGKAGSAHSIAFAALDNGVKASYGLNKRVEAVENARKLTKLDMKLNDTLPQITVDPETYTVTADGETIFYFIHNLCSRFVGPHRSLVSHQPQENNNDEGTQTPLDDVLARLEALLTLLSFNQSSLLSFTVSWTTFAVVGVAAPLLALQVYDTDKNQIKGFEVGIVAFQTCLAAVSLICLSHNLRKYGLTRFLFVDRHAAHMPCFHYDYVKQISGSLRLIILWVLSCFLLKTAREITRLSLVEEEHGSLWLSIAVFLALIVSWTYVSAISLSACVLFHLVCSLQLIHFDDYGELLQRENENVLVFMEEHIRLRFHLSKISHRFRIYLLLQFLVVTASQFVTLLQVTGFGGARTFISGGDFAVSTLVQVVGIIICLHAATKISHRAQGIVSLASRWHALVTCTSDASKLRYCASTGSLEAAKHLNSIFLDYSESDLESSDYIGVPSNIQLASYMSSHHKRQAFVMYLQTNAGGISIFGWTVDRSLVNTIFFFELTLVTFVLSKTIL 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1870 1009 CDD Urease_alpha 28 573 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 SUPERFAMILY Composite domain of metallo-dependent hydrolases 27 204 IPR011059 GO:0016810
Aed7g1870 1009 ProSitePatterns Urease nickel ligands signature. 154 167 IPR029754 GO:0016151
Aed7g1870 1009 Pfam Protein of unknown function (DUF3537) 612 995 IPR021924 -
Aed7g1870 1009 PRINTS Urea amidohydrolase (urease) protein signature 361 377 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 PRINTS Urea amidohydrolase (urease) protein signature 427 442 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 PRINTS Urea amidohydrolase (urease) protein signature 453 466 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 PRINTS Urea amidohydrolase (urease) protein signature 322 339 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 SUPERFAMILY Composite domain of metallo-dependent hydrolases 435 505 IPR011059 GO:0016810
Aed7g1870 1009 Hamap Urease subunit alpha [ureC]. 26 621 IPR005848 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 Pfam Urease alpha-subunit, N-terminal domain 28 146 IPR011612 -
Aed7g1870 1009 Gene3D Urease, beta subunit 11 25 IPR036461 -
Aed7g1870 1009 SUPERFAMILY Metallo-dependent hydrolases 156 574 IPR032466 -
Aed7g1870 1009 Pfam Amidohydrolase family 152 479 IPR006680 GO:0016787
Aed7g1870 1009 ProSiteProfiles Urease domain profile. 156 573 IPR017951 GO:0006807|GO:0009039|GO:0016151
Aed7g1870 1009 Gene3D Urease, subunit C, domain 1 26 506 IPR011059 GO:0016810
Aed7g1870 1009 ProSitePatterns Urease active site. 344 360 IPR017950 GO:0009039
Aed7g1870 1009 Gene3D - 156 571 - -
Aed7g1870 1009 PANTHER UREASE 9 573 - -
Aed7g1870 1009 TIGRFAM urease_alph: urease, alpha subunit 28 573 IPR005848 GO:0006807|GO:0009039|GO:0016151
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1870 Aed-Chr7 21900435 21907144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1870 K01427 - gmx:547672 1081.63