Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1867 ATGCCACAGCCAGAAAAACCGCTCGGTAACAACCTTCCAATAATTAGCATTCCAGGAGACGGTAGATGTTTGTTTAGATCTGTGGTCTATGGTGCATGCCTCAGATCAGGGGAACCATCTCCAAGTCTTAGCAGACAAAAGGAACTTGCAGATGAACTCAGGGCCAAAGTTGTGGATGAATTCATCAAGAGGAGGGCAGACACTGAGTGGTTTCTAGAAGGTGACTTTGACTCCTATACAGTACAGATGCGAAAGCCTCATATATGGGGAGGAGAACCTGAACTTCTCATGTCCTCACATGTTCTACAGATGCCTATAACGGTGGTGATGGAGGATAATAAGAATTCGAGTAAACTTAAAGTTATAGCTGAATACGGACAGGAGTATGGGAAGGATAACCCTATTCGAGTGATCTATCATGGTTATGGCCACTACGATGCATTATTCAAGAGTTCCAACACTACTAGTTATAACATGCAGTACTCCTAA 489 0.4335 MPQPEKPLGNNLPIISIPGDGRCLFRSVVYGACLRSGEPSPSLSRQKELADELRAKVVDEFIKRRADTEWFLEGDFDSYTVQMRKPHIWGGEPELLMSSHVLQMPITVVMEDNKNSSKLKVIAEYGQEYGKDNPIRVIYHGYGHYDALFKSSNTTSYNMQYS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1867 162 SUPERFAMILY Cysteine proteinases 11 150 IPR038765 -
Aed7g1867 162 PANTHER OS09G0487700 PROTEIN 14 150 - -
Aed7g1867 162 PANTHER OTU DOMAIN CONTAINING PROTEIN 14 150 - -
Aed7g1867 162 Gene3D - 4 159 - -
Aed7g1867 162 Pfam OTU-like cysteine protease 18 145 IPR003323 -
Aed7g1867 162 ProSiteProfiles OTU domain profile. 12 151 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1867 Aed-Chr7 21867300 21869342 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1867 K18342 - gmx:100792132 292.737