Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1863 ATGTCGTTGGCATCATCATTCTCGATGCTCCGGCAGCGCGCAGCAGCGGCGCCTCTCCTCCTCCGCCGCTTCCGCTGCCTCCCAATCGCCGCGGCCCGACAACAGCAAAAGCCTAACAAGCACCAGCAAGCCGCCCCGAGCCGCAACCTCCTGAAGGCGAAACAAACACTAAAAGAGTATTCCCCTCTTGCCCCCGTCCTTTCCCTCGAAGAAAGCCCTCCCCTCACGGAATCCCAGGCCATCGGCGTGGTGGCGGCGTCGCAGGCCAATTTCATGCGCGTCATCGTCCCCGAAAACGAGGAACCTTCTTCTTGTGGCGGAAGCAGCTTCCGCGGGGTGGAGCTTCTCTGCGTGGTGAGGGCGCTCTTGAAGAAGATTAAGCGGAGGGTGATGGTTGGGGACAGGGTTCTGGTGGGGTCCATCGATTGGGTCGACCGCAGGGGCATGATCGAGAATGTCTTCCTCCGAACCTCCGACATTCTCGACCCTCCCGTTGCCAACGTCGACCAACTTCTCGTTCTCTTCTCGCTCGAACAGCCCAAACCTGAGCCTTTTACCCTCACGCGCTTCCTCGTCGAAGCTGAATCCACTGGGATCCCTCTCACTCTCGCACTCAACAAGACGGAGCTTGTGGATAATCAGATCATTAGTTCGTGGAAGGCTAGGTTGCGCAGCTGGGGGTATGAGCCAGTTTTTTGCAGTGTTGAATCTGGACATGGACTTGATCTTCTTGCATTCAAGTTGAGGGATCAAACCACGGTGGTTGTTGGGCCTAGTGGGGTTGGCAAGTCTAGTTTGATCAATGCCCTTAGAAGCAATCCTTCTGATGCTGTGGAAGGGGAGAATTGGTTTGAGCCTATTTTGGGAAGCAAGTGGCTTGAGGATCAACGAGTTGGGGAGGTTTCGACCAGAAGTGGTAGAGGGAAGCATACTACACGCCATGTCTCTCTACTTCCATTGTCTGAAGGGGGTTTTCTTGCTGATACTCCTGGATTTAACCAGCCTAGTTTATTGAAAGTGACAAAGCAGTCTCTTGCACAGACTTTTCCTGAAATCAGCAAAATGCTTAGTGCAAATGAGACTGAGAAATGTTCATTTAACAATTGCTTGCATATGGGTGAACCTGGGTGCATTGTGAAGGGAGATTGGGAAAGATATTCCTTCTATTTTCAACTTCTTGATGAAATCAGAATCAGGGAGGAGTTCCAGCTCAGGACATTTGGAACTAAAAAAGAAGGGGATGTAAGGTTGAAAATGGGAGACATGGGTGTTCAGCAAGCAGAACCACGTTTGGAACCTAAGAAGCATAGGAGACAATCTCGGAAAAGGATTAACCAATCAATTTTAGATGACTTGGATGATGACAATGATGACGACAACAATGTGCTTGATGAGGAGAATGATCCCATTTTAAGGGCACTTAGGAATGAAAACTCTTAG 1440 0.5062 MSLASSFSMLRQRAAAAPLLLRRFRCLPIAAARQQQKPNKHQQAAPSRNLLKAKQTLKEYSPLAPVLSLEESPPLTESQAIGVVAASQANFMRVIVPENEEPSSCGGSSFRGVELLCVVRALLKKIKRRVMVGDRVLVGSIDWVDRRGMIENVFLRTSDILDPPVANVDQLLVLFSLEQPKPEPFTLTRFLVEAESTGIPLTLALNKTELVDNQIISSWKARLRSWGYEPVFCSVESGHGLDLLAFKLRDQTTVVVGPSGVGKSSLINALRSNPSDAVEGENWFEPILGSKWLEDQRVGEVSTRSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEISKMLSANETEKCSFNNCLHMGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKKEGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKRINQSILDDLDDDNDDDNNVLDEENDPILRALRNENS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1863 479 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 158 335 IPR030378 GO:0005525
Aed7g1863 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 396 IPR027417 -
Aed7g1863 479 Gene3D - 75 154 IPR012340 -
Aed7g1863 479 ProSiteProfiles EngC GTPase domain profile. 166 333 IPR010914 GO:0003924|GO:0005525
Aed7g1863 479 MobiDBLite consensus disorder prediction 421 479 - -
Aed7g1863 479 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 80 400 IPR004881 GO:0003924|GO:0005525
Aed7g1863 479 Gene3D Probable gtpase engc; domain 3 339 401 - -
Aed7g1863 479 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 70 459 - -
Aed7g1863 479 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 70 459 IPR004881 GO:0003924|GO:0005525
Aed7g1863 479 SUPERFAMILY Nucleic acid-binding proteins 80 154 IPR012340 -
Aed7g1863 479 Pfam RsgA GTPase 154 337 IPR010914 GO:0003924|GO:0005525
Aed7g1863 479 CDD YjeQ_EngC 166 394 IPR004881 GO:0003924|GO:0005525
Aed7g1863 479 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 130 278 IPR004881 GO:0003924|GO:0005525
Aed7g1863 479 Gene3D - 155 337 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1863 K06949 - gmx:100796145 823.157