Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1862 ATGCTTCTTGCATTTGCCGTGATTGCGTTTGCAACAGGATATCTTATGGCTTCTTTCCAAATGATGATCCTCGTATATGCTGGCGGCGTGGTTCTCACCACATTGGTGACTGTCCCTAACTGGCCTTTCTTCAACTGCCATCCTCTCAAATGGTTGGATCCAAGTGAGTCAGAGAAGCATTCAAAGCCTCAACCATCTCTCAATGTGAATTCAAAGAAGAAATCCCTGTTGTTTACAAATGAGAAACTTGTTGGGGTTGTATTTGTGGTACTTGTGCTTCTCGACCTGGTTGTTGCTAATATATTCATCGCGTTTCTGTCTACTTGA 327 0.4312 MLLAFAVIAFATGYLMASFQMMILVYAGGVVLTTLVTVPNWPFFNCHPLKWLDPSESEKHSKPQPSLNVNSKKKSLLFTNEKLVGVVFVVLVLLDLVVANIFIAFLST 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1862 108 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 55 IPR009542 GO:0005787|GO:0006465|GO:0016021
Aed7g1862 108 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED 3 74 - -
Aed7g1862 108 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 3 74 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1862 Aed-Chr7 21834921 21835727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1862 K12946 - gmx:100777545 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1862 7 21834921 21835727 Aed5g1627 5 20419305 20420231 PCT