Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1855 ATGCAAACTAAGAAAAAAACCTCTAGGCGAAATGCCAGTCAAGAGTGTGGCAGTCCTAAGGTTTCAAGAGCACAGAGGAAGGTCTCTGAAAATGGACGAGCTGCTGAAAAGAAAGTCACAGAGTTAATTACATCATCTGCTAGAAAGAATAAATCTTTTGGCACTCTTGAGAATAAAGCTAGAGAGCCCATCCCCTCAACAGATTTGAATAATGGATGTGAGTTTATGGACACTGGGACTTCCAATACTTGTTTGGAAAATGATGCAGTTGATGGGGTTAACTTAGATTTTATGGGTTGTAACAATCAAGCTGTTCATCTGGAGTCTGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAAATTCTGGAGGAAAAGTTGACAGAGTTGATTTTATCAAAATTTTTCAGAATGAAGACCACAAGAGAATTTCTCCATCCCAAGAAATTGAGTCACCACAGGAAGATGCAGTAGATGGTCATATTAGTCAAGACTCTGATACTGCAATGGAGGTAGACATAAACAATTCATCCAACTACTCAAATTCAGGGAGATGTGACAATCAGATGCTTGCTTTAAGCACAAAAAATGTGAATGGTTGCAATTCTGATTTTGATGGAAATGGTCTTTCCATGGAAGTTTCTGCCGTATATCTTGCCATGAATAACTCGAAGCTGGAATGTGTTGATGAGCACAGTCAGGATCCCATGTCTTCTGAAGTATGCACAGAGGAGGATGAATTTGAGGATTTTGATGACTTTGACCCATACTTGTTTATAAAGACATTGCCAGACTTGTCAACAGTGGTTCCAACTTTTAGACGATTGTTGTTGCCTAAGCAGACACGTAGTTGCCCTTCTACTACTCTTGTCCTGGACTTGGATGAAACTTTGGTGCATTCTACCCTGGAACCTTGTGAGGATGTTGACTTCACTTTTCCTGTTAATTTCAATAGTGAGGAGCACATTGTCTATGTACGCTGTCGTCCTCACCTCAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACAGCTAGTCAAAGTATTTATGCTGAGCAACTACTAAATGTGCTTGATCCAAAGCGGAAGATATTCCGCCACCGTGTGTACCGTGAGTCCTGTGTTTATGTGGAGGGGAATTACCTAAAAGATTTAACAGTGCTTGGTCGTGATTTGGCACGTGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAAGTGGATAATGGAATACCGATCGAGAGTTGGTTTGATGATCGTTCAGATCAAGAATTGCTTTTATTACTTCCGTTCTTGGAGAGCTTGGTTGGTGTTGAGGATGTCCGGCCATTAATTGCAAAGAAATTCAACCTGCAGGAGAAAATTGCTGCAGCTACGCATCCTCTAAATACAAATAGAAGAGATTTCTTATCAGAATGA 1440 0.3986 MQTKKKTSRRNASQECGSPKVSRAQRKVSENGRAAEKKVTELITSSARKNKSFGTLENKAREPIPSTDLNNGCEFMDTGTSNTCLENDAVDGVNLDFMGCNNQAVHLESGTIFSPGFHLSKNSGGKVDRVDFIKIFQNEDHKRISPSQEIESPQEDAVDGHISQDSDTAMEVDINNSSNYSNSGRCDNQMLALSTKNVNGCNSDFDGNGLSMEVSAVYLAMNNSKLECVDEHSQDPMSSEVCTEEDEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNSEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLARVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESLVGVEDVRPLIAKKFNLQEKIAAATHPLNTNRRDFLSE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1855 479 SMART forpap2 286 430 IPR004274 -
Aed7g1855 479 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 466 - -
Aed7g1855 479 Gene3D - 273 457 IPR023214 -
Aed7g1855 479 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 466 - -
Aed7g1855 479 MobiDBLite consensus disorder prediction 1 43 - -
Aed7g1855 479 ProSiteProfiles FCP1 homology domain profile. 283 442 IPR004274 -
Aed7g1855 479 Pfam NLI interacting factor-like phosphatase 289 449 IPR004274 -
Aed7g1855 479 CDD HAD_FCP1-like 289 420 - -
Aed7g1855 479 SUPERFAMILY HAD-like 277 453 IPR036412 -
Aed7g1855 479 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 288 451 IPR011948 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1855 Aed-Chr7 21801993 21806342 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1855 K17616 K12778 gmx:100804307 866.685