Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1824 ATGTCGGAGATGGCGAGCCCAGATCCAGAGGGACTCGACGGAGTCCGGATGACGTGGAACGTATGGCCTCGCACGAAGGTCGAATCGAGCAAGTGCGTGATCCCTCTGGCGGCGACGGTGGCTCTGATCCGCGCCCACCCCGACATCCCACGGCTCCAGTACGCCCCTCTCCGGTGCAAGACCTGCACCTCCGCCCTGAACCCCTTCTCCCGCGTGGACTTCACCGCCAAGATCTGGATCTGCCCCTTCTGCTACCAGCGCAACCATTTCCCCCCTCATTACCACCAAATCTCTGAAACCAACTTTCCCGGCGAACTCTACCCGCAATACACCACCGTCGAGTATCTCCTCCCTCTCTCCAATTCCCTCAACCCCTCCCCCGTCTTCCTCTTCCTCCTCGACACCTGCCTCATCGAGGAAGAGATGCACTTCCTCAAATCCGCCCTCCGTCGCGCCATCGGTCTCTTGCCCGACAACGCCCTCGTCGGCTTCGTCTCCTTTGGCACTCAGGTTCAGGTTCACGAATTGGGCTTCTCCGACATGTCCAAGGTTTATGTCTTCCGCGGCTCTAAGGAGATTCCCGCCGATCAGGTCCTCGATCAGCTTGGCCTTTCTTCCGCCGGAAGGAGACCTCACAAGGGCGCTCCCGGTGCCCCCGCCGCCGGCGGATTCCCCAATTCCGGCATCACCCGCTTCCTGCTGCCGGCTTCCGAGTGTGAATATACTCTCATTGCGCTGTTAGATGAATTGCAAACGGATCAATGGCCGGTTCCGCCTGGGCGCCGCCCTGCACGCTGCACCGGTGTTGCTTTGAGTGTTGCCGCGGGGTTGCTGAGTGCTTGTAATCCTGGGACTGGTGCTAGAATCATAGCTTTGGTTGGGGGCCCCTGCACGGAAGGACCTGGCGCGATTGTGTCAAAAGATCTATCTGACCCGGTGCGTTCTCATAAAGATCTTGATAAAGATGCAGCACCATACTTCAAGAAAGCAGTCAAATTTTATGAGGGTCTCGCAAAACAGCTGGTTAGCCAGGGTCACGTTTTAGATATTTTTGCATCAGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTTGCGGTTGAAAGAACTGGCGGCCTTGTTGTCCTGGCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGAGTTTTTGAGGATGGGGAGCAATCTCTTGGTCTCTGTTTCAATGGAACTCTAGAGATAAATTGCTCCAAGGAAATCAAAATTCAGGGAGTTATTGGACCTTGCACCTCGTTGGAAAAGAAAGGGCCTTCTGTTGCTGATACTGTTATAGGAGAGGGAAACACAACAGCATGGAAGATGTGTGGCCTTGACAAGAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCATTCAAACACCCCGGGTGCTGTCAACCCACAATTGTACCTACAGTTCCTTACAAGTTACCAGGACCCAACTGGTCAATCAGTGCTTCGTGTCACAACAGTAACTAGAAGATGGGTAGATAGTACTGTTAGCTCTGAGGAATTGGTTCAAGGGTTTGACCAAGAAACTGCTGCAGTTGTAATGACTAGATTTGCTTCTCTGAAAATGGAGAGTGAGGAAACATTTGATGCTACACGGTGGTTGGATCGGTTTCTCATTCGCCTCTGTTCTAAGTTTGGTGACTACCGCAAGGATGATCCATCATCTTTTACATTAAACCCATCATTTTCACTTTTCCCTCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGACGAGACTGCATATTTCCGCATGTTGTTAAACAGGGAAAATATTAGTAATGCTGCTGTTATGATTCAGCCGTCATTGATATCGTATTCATTTAATGCACTGCCTGCACCAGCATTGTTAGATGTGGCTTCCATTGCCTCAGAGAAGATTTTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGCGCAACTTGGGATACCAGGACCAACCAGAACACCAGGCATTTGCACAACTATTACGAGCTCCACATGACGATGCCCAAATGATAGTTAGAGAACGGTTCCCAGTTCCTAGATTGGTAGTGTGTGACCAACATGGTTCCCAGGCTAGATTTTTATTAGCAAAACTGAATCCCTCAGCAACATATAATAATGCACATGAGATGGCTGCTGGTTCAGATGTAATCTTTACTGATGATGTGAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGTTGGCTGTCCAATCTTGA 2301 0.4954 MSEMASPDPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRAHPDIPRLQYAPLRCKTCTSALNPFSRVDFTAKIWICPFCYQRNHFPPHYHQISETNFPGELYPQYTTVEYLLPLSNSLNPSPVFLFLLDTCLIEEEMHFLKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVFRGSKEIPADQVLDQLGLSSAGRRPHKGAPGAPAAGGFPNSGITRFLLPASECEYTLIALLDELQTDQWPVPPGRRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGAIVSKDLSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDIFASALDQVGVAEMKVAVERTGGLVVLAESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGVIGPCTSLEKKGPSVADTVIGEGNTTAWKMCGLDKSTCLTVMFDLSSSDHSNTPGAVNPQLYLQFLTSYQDPTGQSVLRVTTVTRRWVDSTVSSEELVQGFDQETAAVVMTRFASLKMESEETFDATRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNALPAPALLDVASIASEKILLLDSYFSVVIFHGMTIAQWRNLGYQDQPEHQAFAQLLRAPHDDAQMIVRERFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1824 766 Pfam Sec23/Sec24 helical domain 522 618 IPR006900 GO:0006886|GO:0006888|GO:0030127
Aed7g1824 766 Gene3D Severin 624 728 IPR029006 -
Aed7g1824 766 SUPERFAMILY Helical domain of Sec23/24 522 624 IPR036175 GO:0006886|GO:0006888|GO:0030127
Aed7g1824 766 Gene3D von Willebrand factor, type A domain 126 402 IPR036465 -
Aed7g1824 766 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 2 765 - -
Aed7g1824 766 Gene3D Sec23/Sec24 helical domain 519 763 - -
Aed7g1824 766 SUPERFAMILY vWA-like 127 394 IPR036465 -
Aed7g1824 766 SUPERFAMILY Zn-finger domain of Sec23/24 47 118 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed7g1824 766 Pfam Gelsolin repeat 634 722 IPR007123 -
Aed7g1824 766 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed7g1824 766 CDD Sec23_C 614 734 IPR037550 GO:0030127|GO:0090114
Aed7g1824 766 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 625 765 IPR036180 -
Aed7g1824 766 Gene3D - 10 505 - -
Aed7g1824 766 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 2 765 IPR037364 -
Aed7g1824 766 Pfam Sec23/Sec24 beta-sandwich domain 404 508 IPR012990 -
Aed7g1824 766 Pfam Sec23/Sec24 trunk domain 126 393 IPR006896 GO:0006886|GO:0006888|GO:0030127
Aed7g1824 766 Gene3D - 53 112 - -
Aed7g1824 766 SUPERFAMILY beta-sandwich domain of Sec23/24 8 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1824 Aed-Chr7 21617377 21624239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1824 K14006 - gmx:100789860 1442.17