Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1822 ATGGTGAATGCAGTGAGTCACTGTGTGCTGGTGCCGTTGAAGTCCAATTGCAGAGGGAGCAATACCGATAACAATAGCAACAGCGTCTTCCGAAAACCCTTTGTGAAATTCCCATCCCTCAGCACTCAAATTTGCAACGCCTCTTACCACCGATTCTCTGACACAAAGCACACAACCCTTCTGGTTGAGACTTACCATCTCCATGACAGCCTCAGAGCCTTACTTGCAAAGCTTGAGAATGAAGACTCAAACCCTCTCCAAATACTCGCAGAAGACGCTGATTGGTCCAAAGACCATTTTTGGGCCGTGGTCAGGTTCCTTAAAAGTGCCTCAAGGCTCACCCAAATCCTTCAGGTGTTTGATATGTGGAAGAATATTGAGAAATCGCGGATTAGTGAGTTAAACTATAACAAGATCATAGCCTTGTTATGTGAAGGAGGAATGATGGAAGATGCTTTATCTGCATTGCAAGAGATGACAGTTCAAGGCATGAAGCCTTCTTTGGACACTTACAATCCAATAGTTCATGGGTTATCCAGAGAAGGTAAGTTTAGTGATGCTTTACGTTTCATCGATGAGATGAAAGAATCTGGCTTGGAGCTGGATTCTGAAACCTATGATGGTTTGATTGGAGCCTATGGGAAGTTTCAAATGTATGATGAGATGGGTGAGTGTGTGAAAAATATGGAGTTGGAAGGGTGTTCTCCTGATCATATCACTTTTAATATTCTTATCCAAGAGTATGCTCGTGGTGGCCTATTACAGAGAATGGATAAGCTTTATCAAAGAATGCTTTCTAAGAGAATGCATGTGCAATCTTCTACTTTTGTTGCAATGCTGGAGGCTTATACCACATTTGGGATGGTTCAAAAGATGGAAAAGTTTTATAGAAAAATCTTGAACTCAAAAACATGTCTAGAGGATGATTTGATTAGAAAGGTGGCGGAAGTTTATATCAAGGCCTACATGTTTTCTAGATTAGAGGACCTGGCACTAGATTTATGTTCAGCATTCGGTGAGAGCAAGCTAGTATGGTGTCTCCGACTCCTTTCTCATGCATGTCTTTTGAGTAAAAAAGGCATGGATATAGTTGTTCAAGAAATGCAAGATGCCAAGGTGAATTGGAATGTTACAGTTGCAAATACTATGATGCTGGCTTATGTGAAGATGAAAGATTTCAGGCATTTGAGAATTTTGCTATCTCAGTTGCCAATCTTTCAGGTTCGACCTGATATAATCACTATTGGGATTCTATTTGATGCCAATAGAATTGGTTTTGATGGTAGTGGAGCTTTAGAAACCTGGAGGAGAATGGGTTATCTTTATAGAGTAGTAGAAATGAAAACAGATTCTCTGGTCCTTACTGCATTTGGGAAAGGACATTTTCTTAAAAGCTGTGAAGAAGCGTACTCTTCCCTTCACCCTGAGGACAGAAATAGGAAAACATGGACTTACCATGATCTCATTGCTTTACTGTCAAAACATGCTGATAGTGGTACCATGAAGGCATGGACTGTTAAACCAAGATAG 1530 0.4065 MVNAVSHCVLVPLKSNCRGSNTDNNSNSVFRKPFVKFPSLSTQICNASYHRFSDTKHTTLLVETYHLHDSLRALLAKLENEDSNPLQILAEDADWSKDHFWAVVRFLKSASRLTQILQVFDMWKNIEKSRISELNYNKIIALLCEGGMMEDALSALQEMTVQGMKPSLDTYNPIVHGLSREGKFSDALRFIDEMKESGLELDSETYDGLIGAYGKFQMYDEMGECVKNMELEGCSPDHITFNILIQEYARGGLLQRMDKLYQRMLSKRMHVQSSTFVAMLEAYTTFGMVQKMEKFYRKILNSKTCLEDDLIRKVAEVYIKAYMFSRLEDLALDLCSAFGESKLVWCLRLLSHACLLSKKGMDIVVQEMQDAKVNWNVTVANTMMLAYVKMKDFRHLRILLSQLPIFQVRPDIITIGILFDANRIGFDGSGALETWRRMGYLYRVVEMKTDSLVLTAFGKGHFLKSCEEAYSSLHPEDRNRKTWTYHDLIALLSKHADSGTMKAWTVKPR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1822 509 Gene3D Tetratricopeptide repeat domain 213 329 IPR011990 GO:0005515
Aed7g1822 509 Pfam PPR repeat family 170 213 IPR002885 -
Aed7g1822 509 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 10 497 - -
Aed7g1822 509 Pfam PPR repeat 239 268 IPR002885 -
Aed7g1822 509 Pfam PPR repeat 136 163 IPR002885 -
Aed7g1822 509 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 202 236 IPR002885 -
Aed7g1822 509 TIGRFAM PPR: pentatricopeptide repeat domain 136 167 IPR002885 -
Aed7g1822 509 TIGRFAM PPR: pentatricopeptide repeat domain 170 202 IPR002885 -
Aed7g1822 509 TIGRFAM PPR: pentatricopeptide repeat domain 205 237 IPR002885 -
Aed7g1822 509 TIGRFAM PPR: pentatricopeptide repeat domain 239 269 IPR002885 -
Aed7g1822 509 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Aed7g1822 509 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 237 271 IPR002885 -
Aed7g1822 509 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 10 497 - -
Aed7g1822 509 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 132 166 IPR002885 -
Aed7g1822 509 Gene3D Tetratricopeptide repeat domain 331 508 IPR011990 GO:0005515
Aed7g1822 509 Gene3D Tetratricopeptide repeat domain 89 212 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1822 122 438 Glycosyltransferase AT1G05670 21.118 2.79e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1822 - - gmx:100808924 881.322