Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1807 ATGAATATGGCTTCTCCTCCGGACACGAGCAAGAGTAGCATGAAGCTAGAGCGATACAACAGCTACATCCGGCGAGTGAACAGCACGAAGCTACTAAACGCGTCCTCGAAGATCCTATTCCGCGCGACTCTGTTAGTGGCACTAATCCTGGTGTTCCTCTTCACCTTCAACTACCCACCCCTCGCAGAGACCACGCGCCACCACGTACACGCGCACGCGCACTCCCACTTCCAGCTGATCTCCTCCGCATTCGGCGCCTGGGAGAAGCAGGTCCGCCACTCCGCCACCCCGCGCCGTCCCAACGGCCTCACGGTCCTGGTAACCGGCGCGGCGGGGTTCGTCGGCAGCCACTGCTCCCTCGCGCTGAAGAAGCGCGGAGACGGAGTGGTCGGGCTTGACAACTTCAACAGCTACTACGACCCCTCCCTGAAACGCGCCCGCCAAGCAATGCTGTCGAAACACCAAATCTTCATCGTGGAAGGCGACCTCAACGACGCTCCACTTCTCGAGAAACTGTTCGATGTCGTCGCCATCACTCACATCCTCCACCTCGCCGCGCAGGCCGGCGTCCGCTACGCCATGCAGAATCCCCAATCCTACATCAGCGCCAACATCGCCGGCTTCGTCAACCTCCTCGAAGTTGCGAAATCAGCCAACCCCCAACCCGCTATAGTCTGGGCCTCATCAAGCTCCGTCTACGGCCTCAACACGCAAAACCCGTTCTCGGAGCTCCACCGCACCGACCAGCCCGCCAGCCTCTACGCCGCCACGAAGAAAGCCGGCGAGGAAATCGCCCACACCTACAACCACATCTACGGCCTCTCCCTCACCGGACTCCGCTTCTTCACCGTCTACGGCCCCTGGGGAAGACCAGACATGGCTTATTTCTTCTTCACCAAAGACATCCTCCAGGGGAAGACAATCAATATCTACCAGACGCAGGAGGAGAAGCAGGTCGCGCGTGACTTTACGTACATCGACGACATCGTTAAAGGCTGCCTCGGCGCACTCGACACCGCGCAGAAGAGCACCGGGAGCGGCGGAAAGAAGCGCGCCCCCGCCCAGCTCAGGGTTTACAATCTCGGGAACACGTCTCCCGTTCCGGTGGGGACCTTGGTGTCCATTCTAGAAGGTTTACTGAACACGAAAGCGAAGAAGCACGTGATCAAGATGCCATCAAACGGCGACGTTCCGTACACGCATGCCAATGTCAGCTTGGCTTACAGGGATTTCGCTTACAAACCCACCACCGATCTCGCCACCGGGCTCAGAAAGTTCGTCAAGTGTTACCGTTTTGGTTTTCTCTTGGCTCATAGTCATTTTGGGTCCCTATTATTCAATGCTTTCATATTCATGACATGTGGCACTGATCGAATTGGAATGGATTGTTTGTGGGGTGAGGGTTAG 1407 0.575 MNMASPPDTSKSSMKLERYNSYIRRVNSTKLLNASSKILFRATLLVALILVFLFTFNYPPLAETTRHHVHAHAHSHFQLISSAFGAWEKQVRHSATPRRPNGLTVLVTGAAGFVGSHCSLALKKRGDGVVGLDNFNSYYDPSLKRARQAMLSKHQIFIVEGDLNDAPLLEKLFDVVAITHILHLAAQAGVRYAMQNPQSYISANIAGFVNLLEVAKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTINIYQTQEEKQVARDFTYIDDIVKGCLGALDTAQKSTGSGGKKRAPAQLRVYNLGNTSPVPVGTLVSILEGLLNTKAKKHVIKMPSNGDVPYTHANVSLAYRDFAYKPTTDLATGLRKFVKCYRFGFLLAHSHFGSLLFNAFIFMTCGTDRIGMDCLWGEG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1807 468 Gene3D - 106 417 - -
Aed7g1807 468 Pfam NAD dependent epimerase/dehydratase family 105 342 IPR001509 -
Aed7g1807 468 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 3 430 - -
Aed7g1807 468 PANTHER EPIMERASE-RELATED 3 430 - -
Aed7g1807 468 PRINTS Nucleotide sugar epimerase signature 321 336 - -
Aed7g1807 468 PRINTS Nucleotide sugar epimerase signature 356 371 - -
Aed7g1807 468 PRINTS Nucleotide sugar epimerase signature 131 147 - -
Aed7g1807 468 PRINTS Nucleotide sugar epimerase signature 396 413 - -
Aed7g1807 468 Gene3D - 282 430 - -
Aed7g1807 468 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 431 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1807 Aed-Chr7 21493567 21495524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1807 1 430 Miscellaneous Gene Families AT3G23820 78.636 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1807 K08679 - gmx:100786653 780.4