Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1798 ATGAGTTCCAACAGCAACAGTAGGGTGAGGTTACTAGTACTAGTTGTGCAGCTACTGCTGGTGCTTGGTAATGGTTTTGCAAACTCAGATTTAAGCAAAGACAGAGAAGAATGCGCAGACAAACTAATTGGGCTAGCTAGCTGTGTTCCTTACGTTGGTGGTGAAGCCAAAACCCCAACCATTGATTGCTGCAGTGGTCTCAAAGTAGTCCTTGAGAAGAGCAAGAAATGCATCTGCGTCCTCATCAAAGATCGCGACGACCCCAATCTTGGCATCAAGATCAACGCCACTCTCGCTATTCAACTGCCCTCTGCTTGCCATGCTCCTGCTAATATCACTCAGTGTGTAGATCTTTTGCATTTAGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGATTCCAAAAATCCGCCAAAACAAACAACACTTCTAGTACTGCACCTGCAGTTTCCACTGCTGCAGATGAGAAGGGATCAACTTCAAGTGCTCAGGAAAAGAGGTGGCTGGTGGCACTCCTGCTTTACTCTATCTTACCATTATTCCTTGTTTGA 552 0.4583 MSSNSNSRVRLLVLVVQLLLVLGNGFANSDLSKDREECADKLIGLASCVPYVGGEAKTPTIDCCSGLKVVLEKSKKCICVLIKDRDDPNLGIKINATLAIQLPSACHAPANITQCVDLLHLAPNSPDAKVFEGFQKSAKTNNTSSTAPAVSTAADEKGSTSSAQEKRWLVALLLYSILPLFLV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1798 183 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 116 IPR036312 -
Aed7g1798 183 SMART aai_6 38 115 IPR016140 -
Aed7g1798 183 Gene3D - 35 115 IPR036312 -
Aed7g1798 183 Pfam Probable lipid transfer 33 115 IPR016140 -
Aed7g1798 183 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 175 IPR043325 -
Aed7g1798 183 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 14 175 - -
Aed7g1798 183 CDD AAI_LTSS 45 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1798 Aed-Chr7 21418476 21420359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1798 6 182 Acyl Lipid Metabolism Gene Families AT1G55260 47.778 7.13e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1798 - - pvu:PHAVU_001G268300g 256.144