Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1795 ATGAGTTTAACATTTTCATCGCTCACAACAAAGCCTTGTTCTTCCATCAGTGGGAGCAATAGGAAACCATGTTGTGGTCGTAGAAGATTTGGTGTTATAAGGTCGAAAGTAAACGTGGTTCATCCAACACAAAGAAGAGAGTGTGTGTTTCGCGGCCAGTTGTCAAAACAAGGAGTTCCTCTTGCTGATTTACATGTACAAGAGGTTGTTCACAGGCAGTCTCAGATCATTAGTCCTTCTAGCAGGCCTCCTAAGCCACAGTTCGATCCCACTTTTCTTAACGATGCCTATGAAATGTGCAGAAATATTTGCGCCGAATATGCCAAGACCTTTTATCTGGGAACCTTGCTTATGACGGAAGAAAGACAGAAAGCTACATGGGCAATTTATGTTTGGTGCAGGAGGACGGATGAACTGGTTGATGGTCCTAACGCTGTGTATATGAGCTCTGCTGTTCTTGATAGGTGGGAAGATAGATTGCACGACATTTTCAATGGACAACCCTATGATATGCTTGATGCTGCTCTTAATGATACCCCTTTCAGGGACATGATAGAAGGCATGAGAATGGATACAAGGAAAGACCGATACAACAATTTCCAAGAGTTATATCTTTACTGCTACTATGTGGCGGGAACTGTGGGCTTAATGACTGTTCCAATAATGGGCATTGCCCAGGAGTCTGTCATCCCAGTTCAAACTGTATATGATGCTGCACTATATCTGGGTGTTGGAAATCAACTCACAAACATTCTGAGAGATATTACAAGGGCAAGATTCTACTTCAACCGGGCAGAAGAAGGAGTTTCTCAGCTCGAAAAGGCCAGCCGTTGGCCGGTTTGGTCATCTTTAATGTTGTATCGTGAGATCTTGGATGCAATTGAAGACAACGATTATGACAATTTGACTAGACGAGCCTATGTGGGACGTGCTAAGAAATTTTTGACGTTGCCTCTAGCTTATACTAGATCTCTCTCCAATACCAAAACCAAATTTAGGCCTTCTTTAACAAGTCCTATCTAG 1023 0.4272 MSLTFSSLTTKPCSSISGSNRKPCCGRRRFGVIRSKVNVVHPTQRRECVFRGQLSKQGVPLADLHVQEVVHRQSQIISPSSRPPKPQFDPTFLNDAYEMCRNICAEYAKTFYLGTLLMTEERQKATWAIYVWCRRTDELVDGPNAVYMSSAVLDRWEDRLHDIFNGQPYDMLDAALNDTPFRDMIEGMRMDTRKDRYNNFQELYLYCYYVAGTVGLMTVPIMGIAQESVIPVQTVYDAALYLGVGNQLTNILRDITRARFYFNRAEEGVSQLEKASRWPVWSSLMLYREILDAIEDNDYDNLTRRAYVGRAKKFLTLPLAYTRSLSNTKTKFRPSLTSPI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1795 340 Pfam Squalene/phytoene synthase 107 256 IPR002060 GO:0009058
Aed7g1795 340 CDD Trans_IPPS_HH 98 313 IPR033904 GO:0004311
Aed7g1795 340 MobiDBLite consensus disorder prediction 1 21 - -
Aed7g1795 340 PANTHER PHYTOENE SYNTHASE, CHLOROPLASTIC 254 331 - -
Aed7g1795 340 PANTHER PHYTOENE SYNTHASE, CHLOROPLASTIC 8 255 - -
Aed7g1795 340 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 254 331 - -
Aed7g1795 340 MobiDBLite consensus disorder prediction 1 22 - -
Aed7g1795 340 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 8 255 - -
Aed7g1795 340 Gene3D Farnesyl Diphosphate Synthase 257 319 IPR008949 -
Aed7g1795 340 Gene3D Farnesyl Diphosphate Synthase 90 256 IPR008949 -
Aed7g1795 340 SUPERFAMILY Terpenoid synthases 95 326 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1795 Aed-Chr7 21405151 21406937 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1795 K02291 - gmx:100782394 538.11