Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1793 ATGAGAGGAAGGAGCTATACTCCATCGCCTCCTCCGCGTTACAGCAGAAGAGGTGGCGGAGGAGGGAGGAGTCCCAGCCCTAGGGGTCGTTATCCTCCCCGTCCCCGACAACAAGATCTCCCTACCAGTCTTCTTGTTCGTAACCTTCGCCATGATTGTAGGCCCGAGGATCTTCGCAGACCATTTGGTCAATTCGGTCCTCTCAAGGACATTTACCTTCCTAAGGATTACTACACTGGGGGTCGGTATGATCGAAGGAGGACTCCTCCTCGTTACTCTCGTTCACCCCGCTATTCTCGATCTCCCCCACCACGCCATAGATCTCGTTCTCGCAGTCGTGATTATTATTCCCCTCCTCCTAAACGAAGGGAGTATTCAAGATCTGTCTCCCCGGAGGATAGAAGGTACAATCGTGAAAGATCATATTCACAGCATAGTAGAGAGAGGTCATACTCACAATCTCCACCTTATAATGGGGGGGGCTCAAGGAGCCGTAGTCAGAGTCCAACAAAGGTTCCAGGCCAAGGCCAGAGCAGGAGTCCAAGTCTGAACCGAGATGTAAGACCAGTCCGGGATAGGTCCCCCAGTCAGTGA 594 0.5269 MRGRSYTPSPPPRYSRRGGGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGGRYDRRRTPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPPKRREYSRSVSPEDRRYNRERSYSQHSRERSYSQSPPYNGGGSRSRSQSPTKVPGQGQSRSPSLNRDVRPVRDRSPSQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1793 197 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 80 IPR000504 GO:0003723
Aed7g1793 197 MobiDBLite consensus disorder prediction 108 146 - -
Aed7g1793 197 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 80 180 - -
Aed7g1793 197 Gene3D - 13 113 IPR012677 -
Aed7g1793 197 MobiDBLite consensus disorder prediction 1 197 - -
Aed7g1793 197 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 1 74 - -
Aed7g1793 197 SUPERFAMILY RNA-binding domain, RBD 9 80 IPR035979 GO:0003676
Aed7g1793 197 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 80 180 - -
Aed7g1793 197 MobiDBLite consensus disorder prediction 147 184 - -
Aed7g1793 197 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1793 Aed-Chr7 21392386 21395350 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1793 K12900 - gmx:100775883 135.961