Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1652 ATGGCACTTTGGCAACAAAAACTAGGCTTCTTATATCTACTACTAATAACCCTTTGCTTATTAGCCACTGTGGTTTCTCCACACAGCAGACCTTATACTACTCCAAGTGTCACACGCTTGACTGATTCTTTCCCTCGTGTCCAAGTTGATAGTGCTTTTTCTAAGACCTTTGGGGCCAAAAATATTCAGTTTCTCAGTAATGGGTCCACTGCCACACTTGCTCTTGACAAAATCTCAGGCTCTGGCTTGGTATCACAAAGCAGATACTCCTATGGATTCTTCAGTGCTGCAATCAAATTACCTTCTGATGAATTCCCTCACAACCATGATGAGATAGACATTGAATTGCTTGGTCATGACAAGAGAAATGATTGGGTTATTCAAACAAATATCTATGCCAATGGAAGTGTCAGCACAGGGAGAGAAGAGAAATTCTATTTCTGGTTCGACCCAACACAACAGTACCATTACTACAGCATCTTGTGGAACAGTTATCACACAGTCAACACATACCCTTCTATTTATCCATCAAAGCCAATGTCAGTGTCTGCCACAATATGGGATGGTTCAGAATGGGCTACTCATGGAGGAAAATACCCAGTTAACTATAAGTATGCACCATTTGTTGTTTCATTTGCACAAATAGAACTCAGTGGCTGCATTTCTGATCCAACAGCATCAGTTTCTTCATGCTCTAAGGTCAATAGTCCTTCAGGACTAGACCCAGTTAATGGACCAGAGTTCACTAAGCTTTCACAGCAGCAGATAACAGCTATGGATTGGGCTAGAAAGAAACTCATGTTTTACTCTTACTGCAATGACAGACCCAGATTCAAAGTCATGCCACCAGAATGCCATTGA 861 0.4135 MALWQQKLGFLYLLLITLCLLATVVSPHSRPYTTPSVTRLTDSFPRVQVDSAFSKTFGAKNIQFLSNGSTATLALDKISGSGLVSQSRYSYGFFSAAIKLPSDEFPHNHDEIDIELLGHDKRNDWVIQTNIYANGSVSTGREEKFYFWFDPTQQYHYYSILWNSYHTVNTYPSIYPSKPMSVSATIWDGSEWATHGGKYPVNYKYAPFVVSFAQIELSGCISDPTASVSSCSKVNSPSGLDPVNGPEFTKLSQQQITAMDWARKKLMFYSYCNDRPRFKVMPPECH 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1652 286 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 286 - -
Aed7g1652 286 Gene3D - 33 285 - -
Aed7g1652 286 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 27 212 IPR000757 GO:0004553|GO:0005975
Aed7g1652 286 PIRSF EndGlu_transf 9 286 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aed7g1652 286 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 285 IPR013320 -
Aed7g1652 286 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 249 285 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aed7g1652 286 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 286 IPR044791 GO:0004553
Aed7g1652 286 Pfam Glycosyl hydrolases family 16 52 204 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1652 Aed-Chr7 19811943 19813614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1652 8 286 Glycoside Hydrolase AT1G10550 55.449 6.28e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1652 K08235 - gmx:100778993 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1652 7 19811943 19813614 Aed7g1652 7 19811943 19813614 ECH