Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1622 ATGGTAATTGTCGCATTATCCTCCTCCCTTCCCGGCGGCGGAAGAAACCTCTTCTCCTCGTTACCGTCAATGCCGTCACACCCGGACCCCGCCGCCGCCGTCTCCGCCGCTCCACAGCCCCCAATCCCAATCCCAAAGTACCCCCCTCCCCGCAAAAAACCTCCCAAACCCGCACCGCAAAACCCGGCACTCAAACACCACCACCGCCGCTCCAAGTACCACAAGCCCGTGCCCCGCGATGGCGTCGTCATCCCCGCCGACGGCGCGGACCGCGCCGTCGTAATCGGGGAGTCCGGCGTGTCGTACCTTCTCCCCGGCGCGCCGTTCGAGTTCCAGTTCAGCTACTCGGAGACGCCGAAGGCGAAGCCGATCGCCATCCGTGAGCCAGCGTTCCTGCCCTTCGCACCGCCCACGATGCCGCGGCCGTGGACCGGGAAGGCGCCGCTGAAGGGCAAGAAGTCGAAGAAGATTCCGCTCTTCGACTCGTTCAATCCCCCGGCGGCCGGCGGCACGAAGGGTGTGAAGCGCGTTGAGATGCCCGGGCCGTTTCCCATGGGGCAGTTCCCGCAAGAAGTCAAAACGAGGGAGGAGATTCTCGGAGAGCCTCTCAAGAAGTGGGAGATTCAAATGCTTGTTAAGCCCATGATGTCTTACAATCGCCAGGTTAATCTTGGAAGGGATGGATTAACGCATAACATGCTGGAGTTGATACATTCGCATTGGAAGCGTCGCCGTGTCTGTAAAGTTCGTTGTTTAGGTGTACCAACTGTAGATATGGACAATGTTTGCCATCATATTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGTTGGTGGTATAGTTTATCTTTTCCGTGGCAGAAATTACAACTATAGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTACCCAAAACTTATACAGGATGCTCCAGGAGGATTGACAAAAGATGAAGCTGATGAATTACGGATGAAGGGGAAAAACCTGTTACCAATATGTAAATTAGCCAAAAATGGAGTATATACGTCCCTTGTAAAGGATGTTCGAGATGCTTTTGAAGGAAGTACTTTGGTGAAAATTAACTGCAAGGGATTGGATCCTAGTGATTACAAGAAAATAGGTGCCAAACTTATGGATTTGGTTCCTTGTGTGTTGTTGTCTTTTGATGATGAACAGATATTGATGTGGAGGGGCAAAGACTGGAGATCAAGGTACCCGCAACCTCTTCCAGTTTTTACACCTTCAAAAGCTGGTTTTACAGGGAATTTGGAAAATTCAGGTGAGACTGATGACAATCAATCTAAGAAGCATGAGGGCGACAACATGGTGAACACAAGCCCAAAAATGTTGTCTCTATGGAACCGTGCAATTGAGTCAAGCAAAGCATTGTTGCTGGGCGAGTTTAATCTCGGTCCTGATGCTCTCTTGGAGAAGGTAGAGGAGTTTGACACAGTTTCACAGGCTTTGGAGCACTCCCATCCAGCGTTTAGTTATTCAAGTGAAGAAAATGATGCTGAAGGTTCAACTGGAAACTTTGTAGAAGATAGTTATTCTAGTGATGGCTTACATACTGAAGATGATTATGCTGACTACAGTGATGATGAAGACAAAGAGTTGAATGTGGTGGACACATCAGCTCAACCCGGATCGTTACGTGTTGATATGATTGTCAAAAAGCTAAAACAAAGACCATTGGAGTGA 1722 0.4977 MVIVALSSSLPGGGRNLFSSLPSMPSHPDPAAAVSAAPQPPIPIPKYPPPRKKPPKPAPQNPALKHHHRRSKYHKPVPRDGVVIPADGADRAVVIGESGVSYLLPGAPFEFQFSYSETPKAKPIAIREPAFLPFAPPTMPRPWTGKAPLKGKKSKKIPLFDSFNPPAAGGTKGVKRVEMPGPFPMGQFPQEVKTREEILGEPLKKWEIQMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKVRCLGVPTVDMDNVCHHIEEKTGGKIIHRVGGIVYLFRGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDAPGGLTKDEADELRMKGKNLLPICKLAKNGVYTSLVKDVRDAFEGSTLVKINCKGLDPSDYKKIGAKLMDLVPCVLLSFDDEQILMWRGKDWRSRYPQPLPVFTPSKAGFTGNLENSGETDDNQSKKHEGDNMVNTSPKMLSLWNRAIESSKALLLGEFNLGPDALLEKVEEFDTVSQALEHSHPAFSYSSEENDAEGSTGNFVEDSYSSDGLHTEDDYADYSDDEDKELNVVDTSAQPGSLRVDMIVKKLKQRPLE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1622 573 Gene3D - 202 298 IPR035920 -
Aed7g1622 573 SUPERFAMILY YhbY-like 202 295 IPR035920 -
Aed7g1622 573 MobiDBLite consensus disorder prediction 34 61 - -
Aed7g1622 573 ProSiteProfiles CRM domain profile. 319 415 IPR001890 GO:0003723
Aed7g1622 573 MobiDBLite consensus disorder prediction 422 451 - -
Aed7g1622 573 Gene3D - 321 416 IPR035920 -
Aed7g1622 573 MobiDBLite consensus disorder prediction 500 525 - -
Aed7g1622 573 SMART CRS1_YhbY_2 321 404 IPR001890 GO:0003723
Aed7g1622 573 SMART CRS1_YhbY_2 203 286 IPR001890 GO:0003723
Aed7g1622 573 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 14 569 - -
Aed7g1622 573 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 14 569 IPR044599 GO:0000373
Aed7g1622 573 MobiDBLite consensus disorder prediction 500 553 - -
Aed7g1622 573 Pfam CRS1 / YhbY (CRM) domain 321 404 IPR001890 GO:0003723
Aed7g1622 573 Pfam CRS1 / YhbY (CRM) domain 205 286 IPR001890 GO:0003723
Aed7g1622 573 ProSiteProfiles CRM domain profile. 201 297 IPR001890 GO:0003723
Aed7g1622 573 MobiDBLite consensus disorder prediction 20 82 - -
Aed7g1622 573 SUPERFAMILY YhbY-like 321 412 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1622 Aed-Chr7 19447716 19456599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1622 - - gmx:100801953 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1622 7 19447716 19456599 Aed7g1622 7 19447716 19456599 ECH