Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1575 ATGAAGTTTATGAAACTGGGGTCTCGTCCTGATACCTTTTACACTACAGAAACAATCTCTTCTGAAGTTTCAAGTGACCTCATAATCCAAGTGAAAGGAACTAGATTCCTTCTTCACAAGTTTCCACTGTTGTCAAAATGTTTGTGTCTGCAAAGGCTATGTTCAGACGGTTCTGGTTCTGGTTGTGGTTCTGATTCTGATTCTTCTCCTCAGCGCCAAATAGTCCAACTCCCTGATTTTCCCGGTGGAGTGGAAGCATTTGAACTCTGTGCAAAGTTCTGCTACGGCATAACCATCACCCTCAGTGCTTACAACATTGTGGCGGCGCGATGCGCCGCCGAGTACTTGCACATGTCTGAGGATGTTGAGAAGGGCAATTTGATCTACAAGCTCGATGTTTTCTTCAACTCATGCATCCTCAACGGCTGGAAGGACTCCATTGTGACTCTGCAGACCACGAAGGCGATGCCTTTGTGGTCAGAGGACTTGGCGATTTCCAGCAGATGCATCGAGGCCATTGCCTCCAAGGCCCTAAGCCACCCCTCGAAGGTGAGCTTATCACACAGCCATTCCCGGAGGCTAAGGGATGACGTGTCCTCATTCAACGGAGCGGAAAGTCTGCGAAACAAAAAATCAACAAGCAAGGGATGGTGGGCGGAGGATTTAGCAGATTTGAGCATAGACCTCTTCCTTCTCAAGCTATTGAAGGCTGCCAACATTGTCAAAGCTTCTGCTTCTTCAAAGGTGGAATTGGCCACAAGGGTAGGACTTCAACTGGAGGAAGCAACGGTTAACGATCTTCTGATACGCTCAGTGTCTAAGAACAATAATGGTGTGCATATGATGTATGAAGTGGATTTGGTGATGACCATATTGGAGCAGTTCATGTTGCAAGGTCAGAGTCCTCCGACAAGCCCTCCAAGATCAAGGTTTGCAGTTGAGAGGAGACGGTCGCGTTCGGCGGAGAATATCAACTTTGAGTTTCAAGAGAGTAGGAGATCCTCATCAGCTTCTCATAGCTCCAAACTGAAGGTTGCAAAGCTTGTGGATAGGTACCTTCAGGAGGTTGGAAGGGATGTGAATTTGCCTCTCTCGAAATTCATTGATATTGCTGATACCATACCAGGTTTCGCAAGGCATGACCATGATGATCTGTACAAAGCTATTGACATTTACCTCAAGAGCGAGAGGAAGAGACTATGCAGAATTCTAGACTGCAAAAAGCTGTCTATGGAAGCATGCATGCATGCAGCACAGAATGAGCTTCTCCCCCTAAGAGTTGTTGTGCAAGTTCTCTTCTTTGAGCAAGCAAGAGCAGCAGCAGCAGCTGGTGGCAAAGTCACTGACAACATGCCAAGCAACATAAAAGCACTACTCACAGCTCATGGCATTGACCCTTCAAAGCACACAACAGGAGCACCACCACCACCATTGAGCACCACAACTAGCATGCATGCTGATGACAATTGGAGCAGTGTTTCAGGATTCAAGTCACCAAAGTCAACTAATATTAAGAACCCTACTCTGAGGATGAAACTAGCTGAGGATGATTTGGATGAACATGTTGTGCCTCGTGATGAGATTGGAAGAACTTCTAGATTTAAGGGTCTTCTTGTTGCTCAACCCAAAAGAATGTTTAGCAAGTTGTGGTCTACAAACAGAAGTGCCACTGAAAAGAATTGA 1683 0.4617 MKFMKLGSRPDTFYTTETISSEVSSDLIIQVKGTRFLLHKFPLLSKCLCLQRLCSDGSGSGCGSDSDSSPQRQIVQLPDFPGGVEAFELCAKFCYGITITLSAYNIVAARCAAEYLHMSEDVEKGNLIYKLDVFFNSCILNGWKDSIVTLQTTKAMPLWSEDLAISSRCIEAIASKALSHPSKVSLSHSHSRRLRDDVSSFNGAESLRNKKSTSKGWWAEDLADLSIDLFLLKLLKAANIVKASASSKVELATRVGLQLEEATVNDLLIRSVSKNNNGVHMMYEVDLVMTILEQFMLQGQSPPTSPPRSRFAVERRRSRSAENINFEFQESRRSSSASHSSKLKVAKLVDRYLQEVGRDVNLPLSKFIDIADTIPGFARHDHDDLYKAIDIYLKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAAGGKVTDNMPSNIKALLTAHGIDPSKHTTGAPPPPLSTTTSMHADDNWSSVSGFKSPKSTNIKNPTLRMKLAEDDLDEHVVPRDEIGRTSRFKGLLVAQPKRMFSKLWSTNRSATEKN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1575 560 PANTHER OS12G0117600 PROTEIN 1 230 IPR043454 -
Aed7g1575 560 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 230 - -
Aed7g1575 560 Gene3D Potassium Channel Kv1.1; Chain A 13 125 IPR011333 -
Aed7g1575 560 PANTHER OS12G0117600 PROTEIN 230 558 IPR043454 -
Aed7g1575 560 ProSiteProfiles NPH3 domain profile. 152 438 IPR027356 -
Aed7g1575 560 Pfam NPH3 family 230 414 IPR027356 -
Aed7g1575 560 SUPERFAMILY POZ domain 19 120 IPR011333 -
Aed7g1575 560 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 230 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1575 Aed-Chr7 18733230 18736505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1575 230 472 EF-hand Containing Proteins AT3G44820 35.294 5.56e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1575 - - cam:101491493 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1575 7 18733230 18736505 Aed7g1575 7 18733230 18736505 ECH